Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RSF1
  • Mouse genes Rsf1
  • Rat genes Rsf1
  • Zfish genes rsf1a,rsf1b.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rsf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042393	histone binding	RSF1	IDA		Human	PMID:12972596
Molecular Function	GO:0140751	histone octamer slider activity	RSF1	IDA		Human	PMID:9836642
Molecular Function	GO:0005515	protein binding	RSF1	IPI	UniProtKB:O60264	Human	PMID:12972596
Molecular Function	GO:0005515	protein binding	RSF1	IPI	UniProtKB:P09429	Human	PMID:29721183
Molecular Function	GO:0005515	protein binding	RSF1	IPI	UniProtKB:P09429	Human	PMID:31694235
Molecular Function	GO:0005515	protein binding	RSF1	IPI	UniProtKB:P09429	Human	PMID:32867128
Cellular Component	GO:0005654	nucleoplasm	RSF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	RSF1	IDA		Human	PMID:11788598
Cellular Component	GO:0005634	nucleus	RSF1	IDA		Human	PMID:12972596
Cellular Component	GO:0031213	RSF complex	RSF1	IPI		Human	PMID:12972596
Cellular Component	GO:0031213	RSF complex	RSF1	IPI	UniProtKB:O60264	Human	PMID:9836642
Biological Process	GO:0006338	chromatin remodeling	RSF1	IDA		Human	PMID:9836642
Biological Process	GO:0006352	DNA-templated transcription initiation	RSF1	IDA		Human	PMID:9836642
Biological Process	GO:0043392	negative regulation of DNA binding	RSF1	IDA		Human	PMID:12972596
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	RSF1	IDA		Human	PMID:11944984
Biological Process	GO:0006334	nucleosome assembly	RSF1	EXP		Human	PMID:11691835
Biological Process	GO:0006334	nucleosome assembly	RSF1	IDA		Human	PMID:12972596
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	RSF1	IDA		Human	PMID:11788598
Biological Process	GO:0050434	positive regulation of viral transcription	RSF1	IDA		Human	PMID:11788598
Biological Process	GO:0006355	regulation of DNA-templated transcription	RSF1	IDA		Human	PMID:12972596

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern