Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RUFY3
  • Mouse genes Rufy3
  • Rat genes Rufy3
  • Zfish genes rufy3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rufy3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RUFY3	IPI	UniProtKB:Q13153	Human	PMID:25766321
Molecular Function	GO:0005515	protein binding	RUFY3	IPI	UniProtKB:P20807-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY3	IPI	UniProtKB:Q14088	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RUFY3	IPI	UniProtKB:Q9P2A4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Rufy3	IPI	PR:P61226	Mouse	PMID:16928684
Molecular Function	GO:0005515	protein binding	Rufy3	IPI	PR:Q91VR7	Mouse	PMID:11591653
Molecular Function	GO:0005515	protein binding	Rufy3	IPI	PR:Q61553	Mouse	PMID:24720729
Cellular Component	GO:0005737	cytoplasm	RUFY3	IDA		Human	PMID:25766321
Cellular Component	GO:0005829	cytosol	RUFY3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030425	dendrite	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Cellular Component	GO:0030175	filopodium	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Cellular Component	GO:0030426	growth cone	Rufy3	IDA		Mouse	MGI:MGI:5603691|PMID:24720729
Cellular Component	GO:0030426	growth cone	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Cellular Component	GO:0030027	lamellipodium	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Cellular Component	GO:0043204	perikaryon	Rufy3	IDA		Mouse	MGI:MGI:5603691|PMID:24720729
Cellular Component	GO:0043204	perikaryon	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Biological Process	GO:0007015	actin filament organization	Rufy3	IMP		Mouse	MGI:MGI:5603691|PMID:24720729
Biological Process	GO:0050771	negative regulation of axonogenesis	Rufy3	IDA		Rat	PMID:17439943|RGD:8554472
Biological Process	GO:0045773	positive regulation of axon extension	Rufy3	IDA		Mouse	MGI:MGI:5603691|PMID:24720729
Biological Process	GO:0050772	positive regulation of axonogenesis	Rufy3	IDA		Mouse	PMID:24720729
Biological Process	GO:0030335	positive regulation of cell migration	RUFY3	IDA		Human	PMID:25766321
Biological Process	GO:0090316	positive regulation of intracellular protein transport	Rufy3	IDA		Mouse	MGI:MGI:5603691|PMID:24720729
Biological Process	GO:0050770	regulation of axonogenesis	Rufy3	IMP		Mouse	PMID:24720729
Biological Process	GO:2000114	regulation of establishment of cell polarity	Rufy3	IDA		Mouse	MGI:MGI:5603691|PMID:24720729

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern