Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RXYLT1
  • Mouse genes Rxylt1
  • Rat genes Rxylt1
  • Zfish genes rxylt1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rxylt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RXYLT1	IPI	UniProtKB:O75072	Human	PMID:27601598
Molecular Function	GO:0005515	protein binding	RXYLT1	IPI	UniProtKB:Q8WZA1	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RXYLT1	IPI	UniProtKB:O75072,UniProtKB:Q9H9S5	Human	PMID:29477842
Molecular Function	GO:0005515	protein binding	RXYLT1	IPI	UniProtKB:Q8WZA1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXYLT1	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0120053	ribitol beta-1,4-xylosyltransferase activity	RXYLT1	IDA		Human	PMID:27733679
Molecular Function	GO:0120053	ribitol beta-1,4-xylosyltransferase activity	RXYLT1	IDA		Human	PMID:29477842
Cellular Component	GO:0005794	Golgi apparatus	RXYLT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	RXYLT1	IDA		Human	PMID:25279699
Cellular Component	GO:0005794	Golgi apparatus	RXYLT1	IDA		Human	PMID:29477842
Cellular Component	GO:0005794	Golgi apparatus	Rxylt1	IDA		Mouse	MGI:MGI:5616472|PMID:25279699
Cellular Component	GO:0005654	nucleoplasm	RXYLT1	IDA		Human	GO_REF:0000052
Biological Process	GO:0035269	protein O-linked mannosylation	RXYLT1	IMP		Human	PMID:25279699
Biological Process	GO:0035269	protein O-linked mannosylation	RXYLT1	IDA		Human	PMID:27130732
Biological Process	GO:0035269	protein O-linked mannosylation	RXYLT1	IDA		Human	PMID:27733679

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern