Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes S100A13
  • Mouse genes S100a13
  • Rat genes S100a13
  • Zfish genes s100v1,s100v2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set S100a13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	S100A13	IDA		Human	PMID:16145699
Molecular Function	GO:0005509	calcium ion binding	S100A13	IDA		Human	PMID:17374362
Molecular Function	GO:0005507	copper ion binding	S100A13	IDA		Human	PMID:12746488
Molecular Function	GO:0005507	copper ion binding	S100A13	IDA		Human	PMID:16145699
Molecular Function	GO:0017134	fibroblast growth factor binding	S100A13	IPI	UniProtKB:P05230	Human	PMID:11432880
Molecular Function	GO:0005515	protein binding	S100A13	IPI	UniProtKB:P01583	Human	PMID:12746488
Molecular Function	GO:0005515	protein binding	S100A13	IPI	UniProtKB:P21579	Human	PMID:19284995
Molecular Function	GO:0005515	protein binding	S100A13	IPI	UniProtKB:Q9H8W4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	S100A13	IPI	UniProtKB:Q9HCY8	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	S100A13	IPI	UniProtKB:Q99584	Human	PMID:12746488
Molecular Function	GO:0042803	protein homodimerization activity	S100A13	IPI	UniProtKB:Q99584	Human	PMID:16145699
Molecular Function	GO:0050786	RAGE receptor binding	S100A13	IPI	UniProtKB:Q15109	Human	PMID:15033494
Molecular Function	GO:0008270	zinc ion binding	S100A13	IDA		Human	PMID:12118070
Cellular Component	GO:0062023	collagen-containing extracellular matrix	S100a13	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0005737	cytoplasm	S100A13	IDA		Human	PMID:15821778
Cellular Component	GO:0005829	cytosol	S100A13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	S100A13	IDA		Human	PMID:12746488
Cellular Component	GO:0005576	extracellular region	S100A13	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	S100A13	IDA		Human	PMID:12746488
Cellular Component	GO:0005615	extracellular space	S100a13	IDA		Mouse	PMID:19233122
Cellular Component	GO:0005730	nucleolus	S100A13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	S100A13	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	S100A13	IDA		Human	PMID:12118070
Cellular Component	GO:0005634	nucleus	S100A13	IDA		Human	PMID:15033494
Cellular Component	GO:0048471	perinuclear region of cytoplasm	S100A13	IDA		Human	PMID:10722710
Cellular Component	GO:0005886	plasma membrane	S100A13	IDA		Human	GO_REF:0000052
Biological Process	GO:0008284	positive regulation of cell population proliferation	S100a13	IMP		Rat	PMID:10921913|RGD:2316111
Biological Process	GO:0001819	positive regulation of cytokine production	S100A13	IMP		Human	PMID:20863990
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	S100A13	IDA		Human	PMID:15033494
Biological Process	GO:0032730	positive regulation of interleukin-1 alpha production	S100A13	IDA		Human	PMID:12746488
Biological Process	GO:0008360	regulation of cell shape	S100a13	IMP		Rat	PMID:10921913|RGD:2316111
Biological Process	GO:0046688	response to copper ion	S100a13	IEP		Rat	PMID:12754378|RGD:2316108
Biological Process	GO:0051602	response to electrical stimulus	S100a13	IEP		Rat	PMID:19142028|RGD:2316107

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern