Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SAA3P
  • Mouse genes Saa3
  • Rat genes
  • Zfish genes saa
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Saa3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042056	chemoattractant activity	Saa3	IDA		Mouse	PMID:18820689
Molecular Function	GO:0035662	Toll-like receptor 4 binding	Saa3	IPI	PR:Q9QUK6	Mouse	PMID:18820689
Cellular Component	GO:0005615	extracellular space	Saa3	IDA		Mouse	PMID:18820689
Biological Process	GO:0060326	cell chemotaxis	Saa3	IDA		Mouse	PMID:18820689
Biological Process	GO:0048469	cell maturation	saa	IMP	ZFIN:ZDB-GENO-200723-11	Zfish	PMID:30845179
Biological Process	GO:0071347	cellular response to interleukin-1	Saa3	IDA		Mouse	PMID:7959007
Biological Process	GO:0007252	I-kappaB phosphorylation	Saa3	IDA		Mouse	PMID:18820689
Biological Process	GO:0030593	neutrophil chemotaxis	saa	IMP	ZFIN:ZDB-GENO-200723-11	Zfish	PMID:30845179
Biological Process	GO:0030593	neutrophil chemotaxis	saa	IMP	ZFIN:ZDB-GENO-200723-21	Zfish	PMID:30845179
Biological Process	GO:0030593	neutrophil chemotaxis	saa	IMP	ZFIN:ZDB-GENO-200723-14	Zfish	PMID:30845179
Biological Process	GO:0001780	neutrophil homeostasis	saa	IMP	ZFIN:ZDB-GENO-200723-11	Zfish	PMID:30845179
Biological Process	GO:1990266	neutrophil migration	saa	IMP	ZFIN:ZDB-MRPHLNO-150826-1	Zfish	PMID:24373309
Biological Process	GO:0070944	neutrophil-mediated killing of bacterium	saa	IMP	ZFIN:ZDB-GENO-200723-11	Zfish	PMID:30845179
Biological Process	GO:0070944	neutrophil-mediated killing of bacterium	saa	IMP	ZFIN:ZDB-GENO-200723-14	Zfish	PMID:30845179
Biological Process	GO:0070944	neutrophil-mediated killing of bacterium	saa	IMP	ZFIN:ZDB-GENO-200723-21	Zfish	PMID:30845179
Biological Process	GO:0009617	response to bacterium	Saa3	IEP		Mouse	PMID:23012479
Biological Process	GO:0009617	response to bacterium	saa	IDA		Zfish	PMID:16630661
Biological Process	GO:0009617	response to bacterium	saa	IDA		Zfish	PMID:17055441
Biological Process	GO:0035634	response to stilbenoid	Saa3	IEP		Mouse	MGI:MGI:4943399|PMID:17086191

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern