Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SAMD8
  • Mouse genes Samd8
  • Rat genes Samd8
  • Zfish genes samd8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Samd8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0002950	ceramide phosphoethanolamine synthase activity	Samd8	IDA		Mouse	PMID:25605874
Molecular Function	GO:0002950	ceramide phosphoethanolamine synthase activity	Samd8	IMP	MGI:MGI:5749225	Mouse	PMID:25605874
Molecular Function	GO:0002950	ceramide phosphoethanolamine synthase activity	Samd8	IDA		Mouse	PMID:25667419
Molecular Function	GO:0002950	ceramide phosphoethanolamine synthase activity	Samd8	IMP		Mouse	PMID:25667419
Cellular Component	GO:0005829	cytosol	SAMD8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	SAMD8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005789	endoplasmic reticulum membrane	SAMD8	IDA		Human	PMID:19506037
Biological Process	GO:0046513	ceramide biosynthetic process	SAMD8	IDA		Human	PMID:19506037
Biological Process	GO:0046513	ceramide biosynthetic process	Samd8	IMP	MGI:MGI:5749225	Mouse	PMID:25605874
Biological Process	GO:0046513	ceramide biosynthetic process	Samd8	IDA		Mouse	PMID:25667419
Biological Process	GO:0046513	ceramide biosynthetic process	Samd8	IDA		Mouse	PMID:25605874
Biological Process	GO:0046513	ceramide biosynthetic process	Samd8	IMP		Mouse	PMID:25667419
Biological Process	GO:1905373	ceramide phosphoethanolamine biosynthetic process	Samd8	IDA		Mouse	PMID:25667419
Biological Process	GO:1905373	ceramide phosphoethanolamine biosynthetic process	Samd8	IMP		Mouse	PMID:25667419
Biological Process	GO:2000303	regulation of ceramide biosynthetic process	SAMD8	IDA		Human	PMID:19506037

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern