Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SAP18
  • Mouse genes Sap18
  • Rat genes Sap18,Sap18-ps1
  • Zfish genes sap18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sap18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q14498	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q9H307	Human	PMID:22388736
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q0VD86	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q14498	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q14498-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q14498	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q9H4E7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SAP18	IPI	UniProtKB:Q13547	Human	PMID:9150135
Molecular Function	GO:0005515	protein binding	Sap18	IPI	UniProtKB:Q9Z0P7	Mouse	MGI:MGI:5009176|PMID:14611647
Molecular Function	GO:0003723	RNA binding	SAP18	HDA		Human	PMID:22681889
Cellular Component	GO:0061574	ASAP complex	SAP18	IDA		Human	PMID:12665594
Cellular Component	GO:0005829	cytosol	SAP18	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	SAP18	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	SAP18	IDA		Human	PMID:20966198
Cellular Component	GO:0005654	nucleoplasm	SAP18	IDA		Human	GO_REF:0000052
Biological Process	GO:0048025	negative regulation of mRNA splicing, via spliceosome	SAP18	IDA		Human	PMID:12665594
Biological Process	GO:0043065	positive regulation of apoptotic process	SAP18	IDA		Human	PMID:12665594
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	SAP18	IDA		Human	PMID:20966198
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	SAP18	IMP		Human	PMID:22203037

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern