Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SBDS
  • Mouse genes Sbds
  • Rat genes Sbds
  • Zfish genes sbds
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sbds

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	SBDS	IDA		Human	PMID:18324336
Molecular Function	GO:0005515	protein binding	SBDS	IPI	UniProtKB:P06748	Human	PMID:17475909
Molecular Function	GO:0005515	protein binding	SBDS	IPI	UniProtKB:Q9Y221	Human	PMID:17643419
Molecular Function	GO:0005515	protein binding	SBDS	IPI	UniProtKB:Q13286	Human	PMID:20015955
Molecular Function	GO:0005515	protein binding	SBDS	IPI	UniProtKB:Q96AP0	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	SBDS	IPI	UniProtKB:Q8WZ60	Human	PMID:26871637
Molecular Function	GO:0043022	ribosome binding	SBDS	IDA		Human	PMID:21536732
Molecular Function	GO:0003723	RNA binding	SBDS	HDA		Human	PMID:22658674
Molecular Function	GO:0019843	rRNA binding	SBDS	IDA		Human	PMID:17475909
Cellular Component	GO:0005737	cytoplasm	SBDS	IDA		Human	PMID:15860664
Cellular Component	GO:0005737	cytoplasm	SBDS	IDA		Human	PMID:18324336
Cellular Component	GO:0005829	cytosol	SBDS	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	SBDS	IDA		Human	PMID:15860664
Cellular Component	GO:0005730	nucleolus	SBDS	IDA		Human	PMID:17475909
Cellular Component	GO:0005654	nucleoplasm	SBDS	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SBDS	IDA		Human	PMID:15860664
Cellular Component	GO:0005634	nucleus	SBDS	IDA		Human	PMID:18324336
Cellular Component	GO:0000922	spindle pole	SBDS	IDA		Human	PMID:18324336
Cellular Component	GO:0000922	spindle pole	SBDS	IDA		Human	PMID:19759903
Biological Process	GO:0048539	bone marrow development	SBDS	IMP		Human	PMID:15342903
Biological Process	GO:0030282	bone mineralization	SBDS	IMP		Human	PMID:17920346
Biological Process	GO:0042256	cytosolic ribosome assembly	SBDS	IDA		Human	PMID:21536732
Biological Process	GO:0042256	cytosolic ribosome assembly	sbds	IMP	ZFIN:ZDB-GENO-220428-5	Zfish	PMID:32759502
Biological Process	GO:0042256	cytosolic ribosome assembly	sbds	IMP	ZFIN:ZDB-GENO-220428-8	Zfish	PMID:32759502
Biological Process	GO:0031017	exocrine pancreas development	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-2	Zfish	PMID:18356737
Biological Process	GO:0031017	exocrine pancreas development	sbds	IMP	ZFIN:ZDB-MRPHLNO-120820-3	Zfish	PMID:22872088
Biological Process	GO:0031017	exocrine pancreas development	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-3	Zfish	PMID:18356737
Biological Process	GO:0031017	exocrine pancreas development	sbds	IMP	ZFIN:ZDB-MRPHLNO-120820-2	Zfish	PMID:22872088
Biological Process	GO:0031017	exocrine pancreas development	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-1	Zfish	PMID:18356737
Biological Process	GO:0030851	granulocyte differentiation	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-1	Zfish	PMID:18356737
Biological Process	GO:0030851	granulocyte differentiation	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-3	Zfish	PMID:18356737
Biological Process	GO:0030851	granulocyte differentiation	sbds	IMP	ZFIN:ZDB-MRPHLNO-080726-2	Zfish	PMID:18356737
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	SBDS	IMP		Human	PMID:19759903
Biological Process	GO:0001833	inner cell mass cell proliferation	Sbds	IMP	MGI:MGI:3664792	Mouse	PMID:16914746
Biological Process	GO:0030595	leukocyte chemotaxis	SBDS	IDA		Human	PMID:14743349
Biological Process	GO:0007052	mitotic spindle organization	SBDS	IDA		Human	PMID:18324336
Biological Process	GO:0002573	myeloid leukocyte differentiation	sbds	IMP	ZFIN:ZDB-MRPHLNO-120820-2	Zfish	PMID:22872088
Biological Process	GO:0006638	neutral lipid metabolic process	sbds	IMP	ZFIN:ZDB-GENO-220428-5	Zfish	PMID:32759502
Biological Process	GO:0042254	ribosome biogenesis	sbds	IMP	ZFIN:ZDB-MRPHLNO-120820-2	Zfish	PMID:22872088
Biological Process	GO:0006364	rRNA processing	SBDS	IMP		Human	PMID:17643419

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern