Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCAMP1
  • Mouse genes Scamp1
  • Rat genes Scamp1
  • Zfish genes scamp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scamp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q96T83	Human	PMID:15840657
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q5VWN6-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q8NF64-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P43378	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P49585	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P49638	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P53365	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P53367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q05329	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q8WY91	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q969Z0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q96AL5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q96E29	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q9ULP0-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:P55212	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SCAMP1	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Scamp1	IPI	PR:Q62277	Mouse	PMID:18706977
Molecular Function	GO:0019904	protein domain specific binding	Scamp1	IDA		Rat	PMID:10777571|RGD:631946
Cellular Component	GO:0030136	clathrin-coated vesicle	Scamp1	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	Scamp1	IDA		Mouse	PMID:12490950
Cellular Component	GO:0016020	membrane	SCAMP1	IDA		Human	PMID:15840657
Cellular Component	GO:0055038	recycling endosome membrane	SCAMP1	IDA		Human	PMID:15840657
Cellular Component	GO:0045202	synapse	Scamp1	IDA		Mouse	PMID:18706977
Cellular Component	GO:0030672	synaptic vesicle membrane	Scamp1	IDA		Mouse	PMID:12192047
Cellular Component	GO:0030672	synaptic vesicle membrane	Scamp1	IDA		Rat	PMID:11050114|RGD:68303
Cellular Component	GO:0030672	synaptic vesicle membrane	Scamp1	IDA		Rat	PMID:8404846|RGD:69975
Cellular Component	GO:0043195	terminal bouton	Scamp1	HDA		Rat	PMID:24876496|RGD:10047219
Cellular Component	GO:0005802	trans-Golgi network	SCAMP1	IDA		Human	PMID:15840657
Cellular Component	GO:0042589	zymogen granule membrane	Scamp1	IDA		Mouse	PMID:12192047
Biological Process	GO:0006897	endocytosis	Scamp1	IDA		Rat	PMID:10777571|RGD:631946
Biological Process	GO:0051649	establishment of localization in cell	Scamp1	IMP	MGI:MGI:2445741	Mouse	PMID:10551807
Biological Process	GO:0006887	exocytosis	Scamp1	IMP	MGI:MGI:2445741	Mouse	PMID:10551807
Biological Process	GO:0015031	protein transport	SCAMP1	IDA		Human	PMID:15840657

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern