Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SCAMP2
  • Mouse genes Scamp2
  • Rat genes Scamp2
  • Zfish genes scamp2,scamp2l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Scamp2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SCAMP2	IPI	UniProtKB:Q96T83	Human	PMID:15840657
Molecular Function	GO:0005515	protein binding	SCAMP2	IPI	UniProtKB:P31645	Human	PMID:16870614
Molecular Function	GO:0005515	protein binding	SCAMP2	IPI	UniProtKB:Q14940	Human	PMID:19276089
Molecular Function	GO:0005515	protein binding	SCAMP2	IPI	UniProtKB:Q8IVJ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SCAMP2	IPI	UniProtKB:P21333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Scamp2	IPI	RGD:3714	Rat	PMID:16870614|RGD:4889520
Cellular Component	GO:0070062	extracellular exosome	SCAMP2	HDA		Human	PMID:20458337
Cellular Component	GO:0005794	Golgi apparatus	SCAMP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SCAMP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	SCAMP2	IDA		Human	PMID:15840657
Cellular Component	GO:0055038	recycling endosome membrane	SCAMP2	IDA		Human	PMID:15840657
Cellular Component	GO:0032588	trans-Golgi network membrane	SCAMP2	IDA		Human	PMID:15840657
Cellular Component	GO:0030133	transport vesicle	Scamp2	IDA		Rat	PMID:14578858|RGD:1304451
Biological Process	GO:0015031	protein transport	SCAMP2	IDA		Human	PMID:15840657

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern