Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEC23IP
  • Mouse genes Sec23ip
  • Rat genes Sec23ip
  • Zfish genes sec23ip
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sec23ip

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SEC23IP	IPI	UniProtKB:A1L4H1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23IP	IPI	UniProtKB:Q9Y547	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SEC23IP	IPI	UniProtKB:A1L4H1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23IP	IPI	UniProtKB:O95070	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SEC23IP	IPI	UniProtKB:Q15436	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	SEC23IP	HDA		Human	PMID:22658674
Cellular Component	GO:0005801	cis-Golgi network	Sec23ip	IDA		Mouse	PMID:21640725
Cellular Component	GO:0070971	endoplasmic reticulum exit site	Sec23ip	IDA		Mouse	PMID:21640725
Cellular Component	GO:0005794	Golgi apparatus	SEC23IP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SEC23IP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0097038	perinuclear endoplasmic reticulum	Sec23ip	IDA		Mouse	PMID:21640725
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Sec23ip	IDA		Mouse	PMID:21640725
Biological Process	GO:0001675	acrosome assembly	Sec23ip	IMP	MGI:MGI:5085903	Mouse	PMID:21640725
Biological Process	GO:0007338	single fertilization	Sec23ip	IMP	MGI:MGI:5085903	Mouse	PMID:21640725
Biological Process	GO:0007286	spermatid development	Sec23ip	IMP	MGI:MGI:5085903	Mouse	PMID:21640725

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern