Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SELENOF
  • Mouse genes Selenof
  • Rat genes Selenof
  • Zfish genes selenof
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Selenof

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SELENOF	IPI	UniProtKB:Q8TC12	Human	PMID:29410696
Molecular Function	GO:0005515	protein binding	Selenof	IPI	UniProtKB:Q6P5E4	Mouse	MGI:MGI:3688079|PMID:11278576
Molecular Function	GO:0005515	protein binding	Selenof	IPI	UniProtKB:Q9JLA3	Rat	PMID:11278576|RGD:1302336
Molecular Function	GO:0008430	selenium binding	Selenof	IDA		Rat	PMID:15659830|RGD:8554037
Molecular Function	GO:0008379	thioredoxin peroxidase activity	Selenof	IDA		Rat	PMID:11344099|RGD:728803
Cellular Component	GO:0005788	endoplasmic reticulum lumen	SELENOF	IDA		Human	PMID:11278576
Biological Process	GO:0035092	sperm DNA condensation	Selenof	IMP		Rat	PMID:11344099|RGD:728803

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern