Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SELENOK
  • Mouse genes Selenok
  • Rat genes Selenok
  • Zfish genes selenok
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Selenok

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SELENOK	IPI	UniProtKB:Q9Y6D0	Human	PMID:25117454
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9H6R6	Human	PMID:25368151
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:O15393-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:O15552	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:O95873	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:P15941-11	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:P21964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:P27105	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:P34972	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q13323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q13651	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q14973	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q15546	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q5T7V8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q6IN84	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q6ZMZ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q6ZSS7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q7Z769	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q7Z7G2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q86WK6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q8IWU4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9H169-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9H2K0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9H6H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9NQQ7-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SELENOK	IPI	UniProtKB:Q9Y320	Human	PMID:32296183
Cellular Component	GO:0005783	endoplasmic reticulum	SELENOK	IDA		Human	PMID:16962588
Cellular Component	GO:0005783	endoplasmic reticulum	SELENOK	IDA		Human	PMID:25368151
Cellular Component	GO:0005789	endoplasmic reticulum membrane	SELENOK	IDA		Human	PMID:21220695
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Selenok	IDA		Mouse	PMID:21220695
Biological Process	GO:0006816	calcium ion transport	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0006816	calcium ion transport	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21849499
Biological Process	GO:0051649	establishment of localization in cell	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21849499
Biological Process	GO:0070059	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	SELENOK	IMP		Human	PMID:20692228
Biological Process	GO:0010742	macrophage derived foam cell differentiation	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:23444136
Biological Process	GO:1990266	neutrophil migration	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0032722	positive regulation of chemokine production	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:0002230	positive regulation of defense response to virus by host	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:0032755	positive regulation of interleukin-6 production	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:0071639	positive regulation of monocyte chemotactic protein-1 production	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:1902624	positive regulation of neutrophil migration	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:2000406	positive regulation of T cell migration	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0042102	positive regulation of T cell proliferation	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0032760	positive regulation of tumor necrosis factor production	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:0018345	protein palmitoylation	SELENOK	IDA		Human	PMID:25368151
Biological Process	GO:0018345	protein palmitoylation	Selenok	IDA		Mouse	MGI:MGI:5609483|PMID:25368151
Biological Process	GO:0018345	protein palmitoylation	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:23444136
Biological Process	GO:0050848	regulation of calcium-mediated signaling	Selenok	IMP		Mouse	MGI:MGI:4939970|PMID:21220695
Biological Process	GO:0051223	regulation of protein transport	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:23444136
Biological Process	GO:0045728	respiratory burst after phagocytosis	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0006979	response to oxidative stress	SELENOK	IMP		Human	PMID:16962588
Biological Process	GO:0072678	T cell migration	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695
Biological Process	GO:0042098	T cell proliferation	Selenok	IMP	MGI:MGI:4941878	Mouse	PMID:21220695

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern