Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEMA3C
  • Mouse genes Sema3c
  • Rat genes Sema3c
  • Zfish genes sema3c
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sema3c

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0038191	neuropilin binding	sema3c	IDA		Zfish	PMID:31349972
Molecular Function	GO:0030215	semaphorin receptor binding	Sema3c	IPI	PR:O35375	Mouse	PMID:15239958
Molecular Function	GO:0030215	semaphorin receptor binding	Sema3c	IPI	PR:P97333	Mouse	PMID:15239958
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Sema3c	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0070062	extracellular exosome	SEMA3C	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	Sema3c	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Sema3c	IDA		Mouse	PMID:15239958
Biological Process	GO:0007411	axon guidance	Sema3c	IDA		Mouse	MGI:MGI:5315341|PMID:17021275
Biological Process	GO:0001974	blood vessel remodeling	Sema3c	IMP	MGI:MGI:2150759	Mouse	PMID:11688556
Biological Process	GO:0140074	cardiac endothelial to mesenchymal transition	Sema3c	IDA		Mouse	MGI:MGI:5693177|PMID:26053665
Biological Process	GO:0003215	cardiac right ventricle morphogenesis	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519
Biological Process	GO:0060666	dichotomous subdivision of terminal units involved in salivary gland branching	Sema3c	IDA		Mouse	PMID:17626059
Biological Process	GO:0048484	enteric nervous system development	sema3c	IMP	ZFIN:ZDB-MRPHLNO-150529-1	Zfish	PMID:25839327
Biological Process	GO:0007507	heart development	Sema3c	IMP	MGI:MGI:2150759	Mouse	PMID:11688556
Biological Process	GO:0060174	limb bud formation	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519
Biological Process	GO:0001755	neural crest cell migration	Sema3c	IMP	MGI:MGI:2150759	Mouse	PMID:11688556
Biological Process	GO:0021915	neural tube development	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519
Biological Process	GO:0003151	outflow tract morphogenesis	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519
Biological Process	GO:0003148	outflow tract septum morphogenesis	Sema3c	IMP		Mouse	MGI:MGI:5693177|PMID:26053665
Biological Process	GO:0003148	outflow tract septum morphogenesis	Sema3c	IGI	UniProtKB:O35375|UniProtKB:P97333	Mouse	MGI:MGI:5693177|PMID:26053665
Biological Process	GO:1905312	positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis	Sema3c	IDA		Mouse	MGI:MGI:5693177|PMID:26053665
Biological Process	GO:0009791	post-embryonic development	Sema3c	IMP	MGI:MGI:2150759	Mouse	PMID:11688556
Biological Process	GO:0003350	pulmonary myocardium development	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519
Biological Process	GO:0071526	semaphorin-plexin signaling pathway	Sema3c	IMP		Mouse	MGI:MGI:5693177|PMID:26053665
Biological Process	GO:0001756	somitogenesis	Sema3c	IEP		Mouse	MGI:MGI:4355631|PMID:19666519

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern