Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SEMA4F
  • Mouse genes Sema4f
  • Rat genes Sema4f
  • Zfish genes sema4f
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sema4f

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Sema4f	IPI	PR:Q62108	Mouse	PMID:11483650
Cellular Component	GO:0005783	endoplasmic reticulum	SEMA4F	IDA		Human	GO_REF:0000054
Cellular Component	GO:0098978	glutamatergic synapse	Sema4f	IDA		Rat	PMID:11483650|RGD:8554734
Cellular Component	GO:0098978	glutamatergic synapse	Sema4f	IMP		Rat	PMID:11483650|RGD:8554734
Cellular Component	GO:0016020	membrane	Sema4f	IDA		Rat	PMID:10051670|RGD:69991
Cellular Component	GO:0005886	plasma membrane	Sema4f	IDA		Mouse	PMID:11483650
Cellular Component	GO:0098839	postsynaptic density membrane	Sema4f	IDA		Rat	PMID:11483650|RGD:8554734
Cellular Component	GO:0098839	postsynaptic density membrane	Sema4f	IMP		Rat	PMID:11483650|RGD:8554734
Cellular Component	GO:0045211	postsynaptic membrane	Sema4f	IDA		Rat	PMID:11483650|RGD:8554734
Cellular Component	GO:0045202	synapse	Sema4f	IDA		Rat	PMID:11483650|RGD:8554734
Biological Process	GO:0007411	axon guidance	Sema4f	IDA		Rat	PMID:10051670|RGD:69991
Biological Process	GO:0030517	negative regulation of axon extension	Sema4f	IDA		Rat	PMID:10051670|RGD:69991
Biological Process	GO:0031290	retinal ganglion cell axon guidance	Sema4f	IDA		Rat	PMID:10051670|RGD:69991

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern