Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SET,SETSIP
  • Mouse genes Set
  • Rat genes Setsip
  • Zfish genes seta,setb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Set

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	SETSIP	IDA		Human	PMID:22869753
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P26583	Human	PMID:11909973
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q9BT49	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P63000	Human	PMID:17245428
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P17480	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P20226	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q15572	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q15573	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q53T94	Human	PMID:17318177
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:O00213	Human	PMID:19343227
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P10644	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q00987	Human	PMID:20195357
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q9BT49	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P63000	Human	PMID:23195690
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q12778	Human	PMID:24983498
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:O00560	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q6SJ93	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q9BT49	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SET	IPI	UniProtKB:Q9BT49	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Setsip	IPI	UniProtKB:Q9R0N3	Rat	PMID:24882364|RGD:8693368
Cellular Component	GO:0005737	cytoplasm	SETSIP	IDA		Human	PMID:22869753
Cellular Component	GO:0005737	cytoplasm	SET	IDA		Human	PMID:11909973
Cellular Component	GO:0005737	cytoplasm	SET	IDA		Human	PMID:12524539
Cellular Component	GO:0005783	endoplasmic reticulum	SET	IDA		Human	PMID:11555662
Cellular Component	GO:0005783	endoplasmic reticulum	SET	IDA		Human	PMID:12524539
Cellular Component	GO:0005811	lipid droplet	SETSIP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005811	lipid droplet	SET	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SETSIP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SET	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SETSIP	IDA		Human	PMID:22869753
Cellular Component	GO:0005634	nucleus	SET	IDA		Human	PMID:11555662
Cellular Component	GO:0005634	nucleus	SET	HDA		Human	PMID:16791210
Cellular Component	GO:0005634	nucleus	Set	IDA		Mouse	PMID:10716735
Cellular Component	GO:0048471	perinuclear region of cytoplasm	SET	IDA		Human	PMID:11555662
Cellular Component	GO:0048471	perinuclear region of cytoplasm	SET	IDA		Human	PMID:12524539
Cellular Component	GO:0032991	protein-containing complex	SET	IDA		Human	PMID:11909973
Biological Process	GO:0045446	endothelial cell differentiation	SETSIP	IDA		Human	PMID:22869753
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	SET	IDA		Human	PMID:19343227
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	SET	IGI	UniProtKB:Q99490	Human	PMID:18374643
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	SET	IGI	UniProtKB:Q99538	Human	PMID:18374643
Biological Process	GO:0048884	neuromast development	setb	IMP	ZFIN:ZDB-CRISPR-170223-1	Zfish	PMID:27754889
Biological Process	GO:0048884	neuromast development	setb	IMP	ZFIN:ZDB-MRPHLNO-170223-2	Zfish	PMID:27754889
Biological Process	GO:0048884	neuromast development	setb	IMP	ZFIN:ZDB-MRPHLNO-170223-1	Zfish	PMID:27754889
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	SETSIP	IDA		Human	PMID:22869753
Biological Process	GO:0001756	somitogenesis	setb	IMP	ZFIN:ZDB-MRPHLNO-170223-2	Zfish	PMID:34230583

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern