Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SF1
  • Mouse genes Sf1
  • Rat genes Sf1
  • Zfish genes sf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SF1	IPI	UniProtKB:Q15637	Human	PMID:22365833
Molecular Function	GO:0042802	identical protein binding	SF1	IPI	UniProtKB:Q15637	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:10449420
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:12718882
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q92841	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q15428	Human	PMID:17332742
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q96I25	Human	PMID:17589525
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q15459	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q92841	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q96I25	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:23273425
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O76071	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P25788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q13064	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q6PEX3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q86WT6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q92567	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O14979	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O35343	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O60308	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O60684	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:O75400	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P17844	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26368	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P26369	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P42684	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P52292	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P52293	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P52294	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:P55345	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q12872	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q15428	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q15459	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q3TCX3	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q3USH5	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q60960	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q68FD5	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q7Z7F0	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q80V31	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q8CGZ0	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q8IWX8	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q8TAS1	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q92841	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q96I25	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q99729	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	SF1	IPI	UniProtKB:Q92567	Human	PMID:31515488
Molecular Function	GO:0003723	RNA binding	SF1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SF1	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Sf1	IPI	MGI:MGI:2444886	Mouse	PMID:25145264
Cellular Component	GO:0016604	nuclear body	Sf1	IDA		Mouse	PMID:25145264
Cellular Component	GO:0005654	nucleoplasm	SF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005681	spliceosomal complex	SF1	IPI		Human	PMID:23273425
Cellular Component	GO:0005681	spliceosomal complex	SF1	IDA		Human	PMID:9731529
Cellular Component	GO:0089701	U2AF complex	SF1	IPI		Human	PMID:23273425
Biological Process	GO:0033327	Leydig cell differentiation	Sf1	IGI	MGI:MGI:94891	Mouse	PMID:17495005
Biological Process	GO:0030238	male sex determination	Sf1	IGI	MGI:MGI:94891	Mouse	PMID:17495005
Biological Process	GO:0048662	negative regulation of smooth muscle cell proliferation	Sf1	IMP		Rat	PMID:11748220|RGD:632653
Biological Process	GO:0030575	nuclear body organization	Sf1	IMP		Mouse	PMID:25145264
Biological Process	GO:0050810	regulation of steroid biosynthetic process	Sf1	IGI	MGI:MGI:94891	Mouse	PMID:17495005
Biological Process	GO:0060041	retina development in camera-type eye	sf1	IMP	ZFIN:ZDB-GENO-040826-7	Zfish	PMID:15716491

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern