Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SFR1
  • Mouse genes Sfr1
  • Rat genes Sfr1
  • Zfish genes sfr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sfr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030374	nuclear receptor coactivator activity	SFR1	IDA		Human	PMID:23874500
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q06609	Human	PMID:21252223
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:G4XH65	Human	PMID:23874500
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:O14777	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:O75150	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q13287	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q6NT76-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q6NUQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q96HT8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q6NUQ1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SFR1	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Cellular Component	GO:0005813	centrosome	SFR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	SFR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SFR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SFR1	IDA		Human	PMID:23874500
Cellular Component	GO:0005634	nucleus	Sfr1	IDA		Mouse	MGI:MGI:4868525|PMID:20976249
Cellular Component	GO:0032798	Swi5-Sfr1 complex	SFR1	IDA		Human	PMID:21252223
Cellular Component	GO:0032798	Swi5-Sfr1 complex	Sfr1	IDA		Mouse	MGI:MGI:4868525|PMID:20976249
Biological Process	GO:0071391	cellular response to estrogen stimulus	SFR1	IDA		Human	PMID:23874500
Biological Process	GO:0000724	double-strand break repair via homologous recombination	SFR1	IMP		Human	PMID:21252223
Biological Process	GO:0000724	double-strand break repair via homologous recombination	Sfr1	IMP		Mouse	MGI:MGI:4868525|PMID:20976249
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	SFR1	IDA		Human	PMID:23874500

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern