Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGCG
  • Mouse genes Sgcg
  • Rat genes Sgcg
  • Zfish genes sgcg
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgcg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SGCG	IPI	UniProtKB:O75923	Human	PMID:23414517
Molecular Function	GO:0005515	protein binding	SGCG	IPI	UniProtKB:O00501	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGCG	IPI	UniProtKB:Q9HBV2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sgcg	IPI	PR:P82347	Mouse	PMID:12189167
Molecular Function	GO:0005515	protein binding	Sgcg	IPI	PR:P82349	Mouse	PMID:16524571
Molecular Function	GO:0005515	protein binding	Sgcg	IPI	PR:Q8BX51	Mouse	PMID:12189167
Cellular Component	GO:0016011	dystroglycan complex	Sgcg	IDA		Mouse	PMID:10678176
Cellular Component	GO:0005886	plasma membrane	Sgcg	IDA		Mouse	PMID:17164264
Cellular Component	GO:0005886	plasma membrane	Sgcg	IDA		Mouse	PMID:10481911
Cellular Component	GO:0016012	sarcoglycan complex	Sgcg	IDA		Mouse	PMID:19494113
Cellular Component	GO:0016012	sarcoglycan complex	Sgcg	IDA		Mouse	PMID:16524571
Cellular Component	GO:0016012	sarcoglycan complex	Sgcg	IDA		Mouse	PMID:12189167
Cellular Component	GO:0042383	sarcolemma	Sgcg	IDA		Mouse	PMID:10678176
Cellular Component	GO:0042383	sarcolemma	sgcg	IDA		Zfish	PMID:12659844
Biological Process	GO:0010467	gene expression	Sgcg	IMP		Mouse	PMID:19494113

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern