Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGF29
  • Mouse genes Sgf29
  • Rat genes Sgf29
  • Zfish genes sgf29
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgf29

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035064	methylated histone binding	SGF29	IDA		Human	PMID:20850016
Molecular Function	GO:0035064	methylated histone binding	SGF29	IDA		Human	PMID:26421618
Molecular Function	GO:0140034	methylation-dependent protein binding	Sgf29	IDA		Mouse	PMID:35210392
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P19012	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P68431	Human	PMID:21685874
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:A1A4E9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O14777	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P15884	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P19012	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q68D86	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q6NUQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q8NHS4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9NPJ6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P15884	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P15884	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q6NUQ1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:A1L168	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:A1L190	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O14777	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:O75528	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P08727	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P08779	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P13349	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:P19012	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q14457	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q14525	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q2M2I5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q2NL68	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q6NUQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q7Z3Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q8N3V7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q8NFT6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q8TDR0-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9BXU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9P086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9Y250	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SGF29	IPI	UniProtKB:Q9Y448	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sgf29	IPI	RGD:1564009	Rat	PMID:17334388|RGD:9587456
Cellular Component	GO:0140672	ATAC complex	SGF29	IDA		Human	PMID:19936620
Cellular Component	GO:0140672	ATAC complex	SGF29	IDA		Human	PMID:18838386
Cellular Component	GO:0140672	ATAC complex	Sgf29	IDA		Mouse	MGI:MGI:6827473|PMID:19936620
Cellular Component	GO:0140672	ATAC complex	Sgf29	IDA		Mouse	PMID:20562830
Cellular Component	GO:0005634	nucleus	Sgf29	IDA		Rat	PMID:17334388|RGD:9587456
Cellular Component	GO:0070461	SAGA-type complex	SGF29	IDA		Human	PMID:18838386
Cellular Component	GO:0070461	SAGA-type complex	SGF29	IDA		Human	PMID:20850016
Biological Process	GO:0016573	histone acetylation	SGF29	IDA		Human	PMID:23894581
Biological Process	GO:0043966	histone H3 acetylation	SGF29	IDA		Human	PMID:18838386
Biological Process	GO:0044154	histone H3-K14 acetylation	SGF29	IDA		Human	PMID:19936620
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	SGF29	IDA		Human	PMID:18206972
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	SGF29	IDA		Human	PMID:18206972
Biological Process	GO:0051726	regulation of cell cycle	SGF29	IMP		Human	PMID:19103755
Biological Process	GO:0051726	regulation of cell cycle	Sgf29	IMP		Mouse	MGI:MGI:3835889|PMID:19103755
Biological Process	GO:0051302	regulation of cell division	SGF29	IDA		Human	PMID:20562830
Biological Process	GO:0051302	regulation of cell division	Sgf29	IDA		Mouse	MGI:MGI:4462728|PMID:20562830
Biological Process	GO:0006282	regulation of DNA repair	Sgf29	IDA		Mouse	PMID:35210392
Biological Process	GO:0006355	regulation of DNA-templated transcription	SGF29	IMP		Human	PMID:19936620
Biological Process	GO:0045995	regulation of embryonic development	Sgf29	IDA		Mouse	MGI:MGI:3835889|PMID:19103755
Biological Process	GO:0031063	regulation of histone deacetylation	SGF29	IMP		Human	PMID:20562830
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	SGF29	IDA		Human	PMID:22055187
Biological Process	GO:0090043	regulation of tubulin deacetylation	SGF29	IMP		Human	PMID:20562830

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern