Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGSM1
  • Mouse genes Sgsm1
  • Rat genes Sgsm1
  • Zfish genes sgsm1a,sgsm1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgsm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005096	GTPase activator activity	SGSM1	IDA		Human	PMID:22637480
Molecular Function	GO:0005515	protein binding	Sgsm1	IPI	UniProtKB:Q8BHH2|UniProtKB:Q9R0M6	Mouse	MGI:MGI:5784965|PMID:25220469
Molecular Function	GO:0005515	protein binding	Sgsm1	IPI	PR:Q06219	Mouse	PMID:18784308
Molecular Function	GO:0031267	small GTPase binding	SGSM1	IPI	UniProtKB:P51151	Human	PMID:22637480
Molecular Function	GO:0031267	small GTPase binding	Sgsm1	IPI	UniProtKB:Q8BHH2|UniProtKB:Q9R0M6	Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0005737	cytoplasm	Sgsm1	IDA		Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	SGSM1	IDA		Human	PMID:22637480
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	Sgsm1	IDA		Mouse	MGI:MGI:5784965|PMID:25220469
Cellular Component	GO:0005829	cytosol	SGSM1	IDA		Human	PMID:22637480
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Sgsm1	IDA		Mouse	PMID:18784308

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern