Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SGSM3
  • Mouse genes Sgsm3
  • Rat genes Sgsm3
  • Zfish genes sgsm3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sgsm3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005096	GTPase activator activity	SGSM3	IDA		Human	PMID:17562788
Molecular Function	GO:0005515	protein binding	SGSM3	IPI	UniProtKB:P35240	Human	PMID:17509819
Molecular Function	GO:0005515	protein binding	SGSM3	IPI	UniProtKB:P31513	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sgsm3	IPI	UniProtKB:P17302	Mouse	MGI:MGI:3689782|PMID:15709751
Molecular Function	GO:0005515	protein binding	Sgsm3	IPI	UniProtKB:P08050	Mouse	MGI:MGI:3689782|PMID:15709751
Molecular Function	GO:0031267	small GTPase binding	SGSM3	IDA		Human	PMID:17509819
Molecular Function	GO:0031267	small GTPase binding	SGSM3	IPI	UniProtKB:P20339	Human	PMID:17562788
Molecular Function	GO:0031267	small GTPase binding	SGSM3	IPI	UniProtKB:P51148	Human	PMID:17562788
Molecular Function	GO:0031267	small GTPase binding	SGSM3	IPI	UniProtKB:P61020	Human	PMID:17562788
Cellular Component	GO:0005829	cytosol	SGSM3	IDA		Human	PMID:17562788
Cellular Component	GO:0005921	gap junction	Sgsm3	IDA		Mouse	MGI:MGI:3689782|PMID:15709751
Biological Process	GO:0048227	plasma membrane to endosome transport	SGSM3	IMP		Human	PMID:17562788
Biological Process	GO:0043547	positive regulation of GTPase activity	SGSM3	IDA		Human	PMID:17562788
Biological Process	GO:0045732	positive regulation of protein catabolic process	Sgsm3	IDA		Mouse	MGI:MGI:3689782|PMID:15709751
Biological Process	GO:0032486	Rap protein signal transduction	SGSM3	IEP		Human	PMID:17509819
Biological Process	GO:0032483	regulation of Rab protein signal transduction	SGSM3	IEP		Human	PMID:17509819

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern