Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SH3D19
  • Mouse genes Sh3d19
  • Rat genes Sh3d19
  • Zfish genes sh3d19
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sh3d19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SH3D19	IPI	UniProtKB:Q96HL8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Sh3d19	IPI	UniProtKB:O08641	Mouse	MGI:MGI:3828409|PMID:12615363
Cellular Component	GO:0005829	cytosol	SH3D19	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SH3D19	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SH3D19	IDA		Human	PMID:15280379
Biological Process	GO:0007010	cytoskeleton organization	SH3D19	IMP		Human	PMID:21834987
Biological Process	GO:0051044	positive regulation of membrane protein ectodomain proteolysis	SH3D19	IMP		Human	PMID:15280379
Biological Process	GO:0022604	regulation of cell morphogenesis	SH3D19	IMP		Human	PMID:21834987

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern