Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SH3YL1
  • Mouse genes Sh3yl1
  • Rat genes Sh3yl1
  • Zfish genes sh3yl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sh3yl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019902	phosphatase binding	SH3YL1	IDA		Human	PMID:21624956
Molecular Function	GO:0035091	phosphatidylinositol binding	SH3YL1	IDA		Human	PMID:21624956
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:P14136	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q9H9H4	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:O15156	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:P14136	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q5HYK7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q9H9H4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q5HYK7-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q5HYK7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SH3YL1	IPI	UniProtKB:Q9H9H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Sh3yl1	IPI	UniProtKB:Q91X43	Mouse	MGI:MGI:3828409|PMID:12615363
Cellular Component	GO:0032587	ruffle membrane	SH3YL1	IDA		Human	PMID:21624956
Biological Process	GO:0006661	phosphatidylinositol biosynthetic process	Sh3yl1	IMP		Mouse	PMID:21624956
Biological Process	GO:1900027	regulation of ruffle assembly	Sh3yl1	IMP		Mouse	PMID:21624956

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern