Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SHISA9
  • Mouse genes Shisa9
  • Rat genes
  • Zfish genes shisa9a,shisa9b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Shisa9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:P56387	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q9JLB2	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q9Z0G0	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q91XM9	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:O88951	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q62083	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q925T6	Mouse	PMID:24498314
Molecular Function	GO:0030165	PDZ domain binding	Shisa9	IPI	PR:Q62108	Mouse	PMID:24498314
Cellular Component	GO:0032281	AMPA glutamate receptor complex	Shisa9	IDA		Mouse	PMID:22632720
Cellular Component	GO:0032591	dendritic spine membrane	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Cellular Component	GO:0098978	glutamatergic synapse	Shisa9	IDA		Mouse	PMID:20185686
Cellular Component	GO:0098978	glutamatergic synapse	Shisa9	IPI		Mouse	PMID:20185686
Cellular Component	GO:0098978	glutamatergic synapse	Shisa9	IMP		Mouse	PMID:20185686
Cellular Component	GO:0098978	glutamatergic synapse	Shisa9	IEP		Mouse	PMID:20185686
Cellular Component	GO:0008328	ionotropic glutamate receptor complex	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Cellular Component	GO:0014069	postsynaptic density	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Cellular Component	GO:0098839	postsynaptic density membrane	Shisa9	IDA		Mouse	PMID:20185686
Cellular Component	GO:0098839	postsynaptic density membrane	Shisa9	IEP		Mouse	PMID:20185686
Cellular Component	GO:0098839	postsynaptic density membrane	Shisa9	IMP		Mouse	PMID:20185686
Cellular Component	GO:0045211	postsynaptic membrane	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Cellular Component	GO:0045202	synapse	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Biological Process	GO:2000311	regulation of AMPA receptor activity	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686
Biological Process	GO:2000311	regulation of AMPA receptor activity	Shisa9	IMP		Mouse	PMID:24498314
Biological Process	GO:0098962	regulation of postsynaptic neurotransmitter receptor activity	Shisa9	IMP		Mouse	PMID:20185686
Biological Process	GO:0098962	regulation of postsynaptic neurotransmitter receptor activity	Shisa9	IDA		Mouse	PMID:20185686
Biological Process	GO:0098962	regulation of postsynaptic neurotransmitter receptor activity	Shisa9	IPI		Mouse	PMID:20185686
Biological Process	GO:0048172	regulation of short-term neuronal synaptic plasticity	Shisa9	IDA		Mouse	MGI:MGI:4440391|PMID:20185686

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern