Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SHKBP1
  • Mouse genes Shkbp1
  • Rat genes Shkbp1
  • Zfish genes shkbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Shkbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	SHKBP1	IPI	UniProtKB:Q8TBC3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SHKBP1	IPI	UniProtKB:Q13618	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	SHKBP1	IPI	UniProtKB:Q13618	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	SHKBP1	IPI	UniProtKB:O43395	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SHKBP1	IPI	UniProtKB:Q13618	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SHKBP1	IPI	UniProtKB:Q9BS40	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Shkbp1	IPI	UniProtKB:Q9JJ40	Mouse	MGI:MGI:5508267|PMID:16054660
Molecular Function	GO:0005515	protein binding	Shkbp1	IPI	UniProtKB:Q8R550	Mouse	MGI:MGI:5700492|PMID:21830225
Molecular Function	GO:0005515	protein binding	Shkbp1	IPI	PR:Q60631	Mouse	PMID:11152963
Molecular Function	GO:0005515	protein binding	Shkbp1	IPI	PR:Q8R550	Mouse	PMID:11152963
Biological Process	GO:0045742	positive regulation of epidermal growth factor receptor signaling pathway	Shkbp1	IMP		Mouse	MGI:MGI:5700492|PMID:21830225

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern