Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SIL1
  • Mouse genes Sil1
  • Rat genes Sil1
  • Zfish genes sil1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sil1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000774	adenyl-nucleotide exchange factor activity	SIL1	IDA		Human	PMID:12356756
Molecular Function	GO:0042802	identical protein binding	SIL1	IPI	UniProtKB:Q9H173	Human	PMID:31258504
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:P11021	Human	PMID:12356756
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:P11021	Human	PMID:24473200
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:P11021	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:P11021	Human	PMID:31258504
Molecular Function	GO:0005515	protein binding	SIL1	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Cellular Component	GO:0005783	endoplasmic reticulum	SIL1	IDA		Human	PMID:12356756
Cellular Component	GO:0005783	endoplasmic reticulum	Sil1	IDA		Mouse	PMID:16116427
Cellular Component	GO:0005615	extracellular space	SIL1	HDA		Human	PMID:16502470
Biological Process	GO:0001654	eye development	sil1	IMP	ZFIN:ZDB-MRPHLNO-170718-3	Zfish	PMID:27792754
Biological Process	GO:0001654	eye development	sil1	IMP	ZFIN:ZDB-MRPHLNO-170718-4	Zfish	PMID:27792754
Biological Process	GO:0048741	skeletal muscle fiber development	sil1	IMP	ZFIN:ZDB-MRPHLNO-170718-4	Zfish	PMID:27792754
Biological Process	GO:0048741	skeletal muscle fiber development	sil1	IMP	ZFIN:ZDB-MRPHLNO-170718-3	Zfish	PMID:27792754

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern