Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SIPA1L3
  • Mouse genes Sipa1l3
  • Rat genes Sipa1l3
  • Zfish genes sipa1l3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sipa1l3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SIPA1L3	IPI	UniProtKB:P63104	Human	PMID:15161933
Molecular Function	GO:0005515	protein binding	SIPA1L3	IPI	UniProtKB:P63104	Human	PMID:28514442
Cellular Component	GO:0045177	apical part of cell	SIPA1L3	IMP		Human	PMID:26231217
Cellular Component	GO:0005615	extracellular space	SIPA1L3	HDA		Human	PMID:22664934
Cellular Component	GO:0005794	Golgi apparatus	SIPA1L3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SIPA1L3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SIPA1L3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001725	stress fiber	SIPA1L3	IDA		Human	PMID:26231217
Cellular Component	GO:0061689	tricellular tight junction	SIPA1L3	IDA		Human	PMID:26231217
Biological Process	GO:0007010	cytoskeleton organization	Sipa1l3	IMP		Mouse	MGI:MGI:5697095|PMID:26231217
Biological Process	GO:0003382	epithelial cell morphogenesis	SIPA1L3	IDA		Human	PMID:26231217
Biological Process	GO:0003382	epithelial cell morphogenesis	Sipa1l3	IMP		Mouse	MGI:MGI:5697095|PMID:26231217
Biological Process	GO:0090162	establishment of epithelial cell polarity	SIPA1L3	IDA		Human	PMID:26231217
Biological Process	GO:0090162	establishment of epithelial cell polarity	Sipa1l3	IMP		Mouse	MGI:MGI:5697095|PMID:26231217
Biological Process	GO:0001654	eye development	Sipa1l3	IMP		Mouse	MGI:MGI:5697095|PMID:26231217
Biological Process	GO:0002244	hematopoietic progenitor cell differentiation	Sipa1l3	IMP		Mouse	PMID:24029230
Biological Process	GO:0002088	lens development in camera-type eye	sipa1l3	IMP	ZFIN:ZDB-MRPHLNO-160108-12	Zfish	PMID:26231217
Biological Process	GO:0002088	lens development in camera-type eye	sipa1l3	IMP	ZFIN:ZDB-MRPHLNO-160108-11	Zfish	PMID:26231217

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern