Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SIVA1
  • Mouse genes Siva1
  • Rat genes Siva1
  • Zfish genes siva1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Siva1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005175	CD27 receptor binding	SIVA1	IPI	UniProtKB:P26842	Human	PMID:9177220
Molecular Function	GO:0005175	CD27 receptor binding	Siva1	IPI	UniProtKB:P41272	Mouse	MGI:MGI:3696501|PMID:12478477
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:Q07817-1	Human	PMID:12011449
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:P10415	Human	PMID:14739602
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:Q07817	Human	PMID:14739602
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:P26842	Human	PMID:16683188
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:Q9NR77	Human	PMID:16683188
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:P03129	Human	PMID:17348035
Molecular Function	GO:0005515	protein binding	SIVA1	IPI	UniProtKB:P26842	Human	PMID:9177220
Molecular Function	GO:0005164	tumor necrosis factor receptor binding	Siva1	IPI	UniProtKB:O35714|UniProtKB:P47741	Mouse	MGI:MGI:3696501|PMID:12478477
Molecular Function	GO:0001618	virus receptor activity	Siva1	IDA		Mouse	MGI:MGI:3700425|PMID:11601913
Cellular Component	GO:0005654	nucleoplasm	SIVA1	IDA		Human	GO_REF:0000052
Biological Process	GO:0097191	extrinsic apoptotic signaling pathway	SIVA1	IDA		Human	PMID:9177220

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern