Comparative GO Graph (mouse, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Skint1
  • Rat genes Skint1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Skint1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0071944	cell periphery	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0030855	epithelial cell differentiation	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0042492	gamma-delta T cell differentiation	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0030858	positive regulation of epithelial cell differentiation	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0045588	positive regulation of gamma-delta T cell differentiation	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0045582	positive regulation of T cell differentiation	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0033089	positive regulation of T cell differentiation in thymus	Skint1	IMP		Mouse	PMID:21737317
Biological Process	GO:0045059	positive thymic T cell selection	Skint1	IMP		Mouse	PMID:18408721
Biological Process	GO:0045059	positive thymic T cell selection	Skint1	IDA		Mouse	PMID:21300860
Biological Process	GO:0030217	T cell differentiation	Skint1	IDA		Mouse	PMID:21300860

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern