Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLAMF9
  • Mouse genes Slamf9
  • Rat genes Slamf9
  • Zfish genes si:cabz01074946.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slamf9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0009986	cell surface	SLAMF9	IDA		Human	PMID:31880316
Cellular Component	GO:0009986	cell surface	Slamf9	IDA		Mouse	PMID:31346085
Biological Process	GO:0035393	chemokine (C-X-C motif) ligand 9 production	Slamf9	IMP	UniProtKB:Q96A28	Mouse	PMID:31880316
Biological Process	GO:0042742	defense response to bacterium	Slamf9	IMP	MGI:MGI:5692740	Mouse	PMID:31880316
Biological Process	GO:0032604	granulocyte macrophage colony-stimulating factor production	Slamf9	IMP	UniProtKB:Q96A28	Mouse	PMID:31880316
Biological Process	GO:0032611	interleukin-1 beta production	Slamf9	IMP	UniProtKB:Q96A28	Mouse	PMID:31880316
Biological Process	GO:0002410	plasmacytoid dendritic cell chemotaxis	Slamf9	IMP	MGI:MGI:6364884	Mouse	PMID:31346085
Biological Process	GO:0002373	plasmacytoid dendritic cell cytokine production	Slamf9	IMP	MGI:MGI:6364884	Mouse	PMID:31346085
Biological Process	GO:0002273	plasmacytoid dendritic cell differentiation	Slamf9	IMP	MGI:MGI:6364884	Mouse	PMID:31346085
Biological Process	GO:0032640	tumor necrosis factor production	Slamf9	IMP	UniProtKB:Q96A28	Mouse	PMID:31880316

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern