Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Slc13a5

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes SLC13A5
- Mouse genes Slc13a5
- Rat genes Slc13a5
- Zfish genes slc13a5a,slc13a5b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc13a5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015137	citrate transmembrane transporter activity	SLC13A5	IDA		Human	PMID:21264516
Molecular Function	GO:0015137	citrate transmembrane transporter activity	SLC13A5	IDA		Human	PMID:26176240
Molecular Function	GO:0015137	citrate transmembrane transporter activity	SLC13A5	IMP		Human	PMID:30054523
Molecular Function	GO:0015137	citrate transmembrane transporter activity	Slc13a5	IDA		Mouse	PMID:14656221
Molecular Function	GO:0015137	citrate transmembrane transporter activity	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Molecular Function	GO:0015137	citrate transmembrane transporter activity	Slc13a5	IDA		Rat	PMID:16524379\|RGD:2303797
Molecular Function	GO:0005343	organic acid:sodium symporter activity	SLC13A5	IDA		Human	PMID:12445824
Molecular Function	GO:0005343	organic acid:sodium symporter activity	SLC13A5	IDA		Human	PMID:26324167
Molecular Function	GO:0005343	organic acid:sodium symporter activity	SLC13A5	IDA		Human	PMID:33597751
Molecular Function	GO:0005343	organic acid:sodium symporter activity	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Molecular Function	GO:0005343	organic acid:sodium symporter activity	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Molecular Function	GO:0005343	organic acid:sodium symporter activity	Slc13a5	IDA		Rat	PMID:16524379\|RGD:2303797
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P26371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P59991	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P60328	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q6UY14-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q701N4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q8IUC1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q8IUG1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q8NBJ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q9BS75	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q9BYQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q9BYQ3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q9BYQ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLC13A5	IPI	UniProtKB:Q9BYR7	Human	PMID:32296183
Molecular Function	GO:0017153	sodium:dicarboxylate symporter activity	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Molecular Function	GO:0015141	succinate transmembrane transporter activity	Slc13a5	IDA		Mouse	PMID:14656221
Molecular Function	GO:0015141	succinate transmembrane transporter activity	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Molecular Function	GO:0015141	succinate transmembrane transporter activity	Slc13a5	IDA		Rat	PMID:16524379\|RGD:2303797
Molecular Function	GO:0015142	tricarboxylic acid transmembrane transporter activity	Slc13a5	IDA		Mouse	PMID:14656221
Cellular Component	GO:0016323	basolateral plasma membrane	Slc13a5	IDA		Rat	PMID:16973915\|RGD:2303799
Cellular Component	GO:0005829	cytosol	SLC13A5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SLC13A5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLC13A5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLC13A5	IDA		Human	PMID:26384929
Cellular Component	GO:0005886	plasma membrane	SLC13A5	IMP		Human	PMID:30054523
Biological Process	GO:0015742	alpha-ketoglutarate transport	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0015742	alpha-ketoglutarate transport	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0071285	cellular response to lithium ion	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0071285	cellular response to lithium ion	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:12445824
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:21264516
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:26176240
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:26384929
Biological Process	GO:0015746	citrate transport	SLC13A5	IMP		Human	PMID:30054523
Biological Process	GO:0015746	citrate transport	SLC13A5	IDA		Human	PMID:33597751
Biological Process	GO:0015746	citrate transport	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0015746	citrate transport	Slc13a5	IMP		Mouse	MGI:MGI:6449397\|PMID:32682952
Biological Process	GO:0015746	citrate transport	Slc13a5	IDA		Mouse	PMID:14656221
Biological Process	GO:0015746	citrate transport	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Biological Process	GO:0015746	citrate transport	Slc13a5	IDA		Rat	PMID:16524379\|RGD:2303797
Biological Process	GO:0015746	citrate transport	slc13a5a	IDA		Zfish	PMID:25617245
Biological Process	GO:0015741	fumarate transport	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0015741	fumarate transport	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0015729	oxaloacetate transport	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0015729	oxaloacetate transport	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0015744	succinate transport	SLC13A5	IDA		Human	PMID:26324167
Biological Process	GO:0015744	succinate transport	Slc13a5	IDA		Mouse	MGI:MGI:6716963\|PMID:26324167
Biological Process	GO:0015744	succinate transport	Slc13a5	IDA		Mouse	PMID:14656221
Biological Process	GO:0015744	succinate transport	Slc13a5	IDA		Rat	PMID:12177002\|RGD:633417
Biological Process	GO:0015744	succinate transport	Slc13a5	IDA		Rat	PMID:16524379\|RGD:2303797
Biological Process	GO:0006842	tricarboxylic acid transport	Slc13a5	IDA		Mouse	PMID:14656221

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.