Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC38A9
  • Mouse genes Slc38a9
  • Rat genes Slc38a9
  • Zfish genes slc38a9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc38a9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015171	amino acid transmembrane transporter activity	SLC38A9	IDA		Human	PMID:25561175
Molecular Function	GO:0015171	amino acid transmembrane transporter activity	SLC38A9	IDA		Human	PMID:25567906
Molecular Function	GO:0015485	cholesterol binding	SLC38A9	IDA		Human	PMID:28336668
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	SLC38A9	IDA		Human	PMID:30181260
Molecular Function	GO:0061459	L-arginine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:25567906
Molecular Function	GO:0061459	L-arginine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:29053970
Molecular Function	GO:0061459	L-arginine transmembrane transporter activity	slc38a9	IDA		Zfish	PMID:29872228
Molecular Function	GO:0015182	L-asparagine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:25561175
Molecular Function	GO:0015186	L-glutamine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:25561175
Molecular Function	GO:0015186	L-glutamine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:31295473
Molecular Function	GO:0015190	L-leucine transmembrane transporter activity	SLC38A9	IDA		Human	PMID:29053970
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:O43504	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q0VGL1	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q5VZM2	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q6IAA8	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q7L523	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q9HB90	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q9UHA4	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q9Y2Q5	Human	PMID:25561175
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:O43504	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q0VGL1	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q5VZM2	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q6IAA8	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q7L523	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q9HB90	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q9Y2Q5	Human	PMID:25567906
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:O15118,UniProtKB:Q6IAA8,UniProtKB:Q7L523,UniProtKB:Q9HB90	Human	PMID:28336668
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:O14894	Human	PMID:30956113
Molecular Function	GO:0005515	protein binding	SLC38A9	IPI	UniProtKB:Q7L523	Human	PMID:32433612
Molecular Function	GO:0032935	sterol sensor activity	SLC38A9	IDA		Human	PMID:28336668
Cellular Component	GO:0005770	late endosome	SLC38A9	IDA		Human	PMID:25561175
Cellular Component	GO:0005765	lysosomal membrane	SLC38A9	IMP		Human	PMID:29053970
Cellular Component	GO:0005765	lysosomal membrane	SLC38A9	IDA		Human	PMID:30956113
Cellular Component	GO:0005764	lysosome	SLC38A9	IDA		Human	PMID:25561175
Cellular Component	GO:0005764	lysosome	SLC38A9	IDA		Human	PMID:25567906
Cellular Component	GO:0016020	membrane	slc38a9	IDA		Zfish	PMID:29872228
Biological Process	GO:0006520	amino acid metabolic process	slc38a9	IMP	ZFIN:ZDB-GENO-230227-1	Zfish	PMID:35457018
Biological Process	GO:0003333	amino acid transmembrane transport	SLC38A9	IDA		Human	PMID:25567906
Biological Process	GO:0003333	amino acid transmembrane transport	SLC38A9	IDA		Human	PMID:29053970
Biological Process	GO:0006867	asparagine transport	SLC38A9	IDA		Human	PMID:25561175
Biological Process	GO:0071230	cellular response to amino acid stimulus	SLC38A9	IDA		Human	PMID:25561175
Biological Process	GO:0071230	cellular response to amino acid stimulus	SLC38A9	IDA		Human	PMID:25567906
Biological Process	GO:0071230	cellular response to amino acid stimulus	SLC38A9	IDA		Human	PMID:29053970
Biological Process	GO:0006868	glutamine transport	SLC38A9	IDA		Human	PMID:25561175
Biological Process	GO:0006868	glutamine transport	SLC38A9	IDA		Human	PMID:31295473
Biological Process	GO:1903826	L-arginine transmembrane transport	SLC38A9	IDA		Human	PMID:25567906
Biological Process	GO:0032008	positive regulation of TOR signaling	SLC38A9	IDA		Human	PMID:25561175
Biological Process	GO:0032008	positive regulation of TOR signaling	SLC38A9	IDA		Human	PMID:25567906
Biological Process	GO:1904263	positive regulation of TORC1 signaling	SLC38A9	IDA		Human	PMID:28336668
Biological Process	GO:1904263	positive regulation of TORC1 signaling	SLC38A9	IDA		Human	PMID:30181260
Biological Process	GO:1900037	regulation of cellular response to hypoxia	slc38a9	IMP	ZFIN:ZDB-GENO-230227-1	Zfish	PMID:35457018
Biological Process	GO:0006111	regulation of gluconeogenesis	slc38a9	IMP	ZFIN:ZDB-GENO-230227-1	Zfish	PMID:35457018
Biological Process	GO:0006110	regulation of glycolytic process	slc38a9	IMP	ZFIN:ZDB-GENO-230227-1	Zfish	PMID:35457018

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern