Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLC44A4
  • Mouse genes Slc44a4
  • Rat genes Slc44a4
  • Zfish genes slc44a4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slc44a4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015220	choline transmembrane transporter activity	SLC44A4	IMP		Human	PMID:28013291
Molecular Function	GO:0090422	thiamine pyrophosphate transmembrane transporter activity	SLC44A4	IMP		Human	PMID:24379411
Molecular Function	GO:0090422	thiamine pyrophosphate transmembrane transporter activity	Slc44a4	IDA		Mouse	MGI:MGI:5902675|PMID:24379411
Cellular Component	GO:0016324	apical plasma membrane	SLC44A4	IDA		Human	PMID:24379411
Cellular Component	GO:0070062	extracellular exosome	SLC44A4	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	SLC44A4	HDA		Human	PMID:23533145
Cellular Component	GO:0005886	plasma membrane	SLC44A4	IDA		Human	PMID:24379411
Biological Process	GO:0008292	acetylcholine biosynthetic process	SLC44A4	IMP		Human	PMID:23651124
Biological Process	GO:0008292	acetylcholine biosynthetic process	SLC44A4	IMP		Human	PMID:28013291
Biological Process	GO:0061526	acetylcholine secretion	SLC44A4	IMP		Human	PMID:23651124
Biological Process	GO:0061526	acetylcholine secretion	SLC44A4	IMP		Human	PMID:28013291
Biological Process	GO:0015871	choline transport	SLC44A4	IMP		Human	PMID:23651124
Biological Process	GO:0015871	choline transport	SLC44A4	IMP		Human	PMID:28013291
Biological Process	GO:0035675	neuromast hair cell development	slc44a4	IMP		Zfish	PMID:28013291|ZFIN:ZDB-PUB-161226-1
Biological Process	GO:0048840	otolith development	slc44a4	IMP	ZFIN:ZDB-MRPHLNO-170601-2	Zfish	PMID:28013291
Biological Process	GO:0048840	otolith development	slc44a4	IMP	ZFIN:ZDB-MRPHLNO-170601-1	Zfish	PMID:28013291
Biological Process	GO:0032475	otolith formation	slc44a4	IMP		Zfish	PMID:28013291|ZFIN:ZDB-PUB-161226-1
Biological Process	GO:0030307	positive regulation of cell growth	SLC44A4	IMP		Human	PMID:23651124
Biological Process	GO:0030974	thiamine pyrophosphate transmembrane transport	SLC44A4	IDA		Human	PMID:24379411
Biological Process	GO:0030974	thiamine pyrophosphate transmembrane transport	SLC44A4	IMP		Human	PMID:24379411
Biological Process	GO:0030974	thiamine pyrophosphate transmembrane transport	Slc44a4	IDA		Mouse	MGI:MGI:5902675|PMID:24379411

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern