Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLCO1B1,SLCO1B3,SLCO1B7
  • Mouse genes Slco1b2
  • Rat genes Slco1b2
  • Zfish genes slco1d1,slco1e1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slco1b2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015125	bile acid transmembrane transporter activity	Slco1b2	IDA		Rat	PMID:10500057|RGD:631887
Molecular Function	GO:0035673	oligopeptide transmembrane transporter activity	Slco1b2	IDA		Rat	PMID:11677211|RGD:2303133
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1B3	IDA		Human	PMID:19129463
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1B3	IDA		Human	PMID:26383540
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1B1	IDA		Human	PMID:10873595
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1B1	IDA		Human	PMID:19129463
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	SLCO1B1	IDA		Human	PMID:26383540
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	Slco1b2	IDA		Rat	PMID:19129463|RGD:155230708
Molecular Function	GO:0008514	organic anion transmembrane transporter activity	slco1d1	IDA		Zfish	PMID:24126916
Molecular Function	GO:0015132	prostaglandin transmembrane transporter activity	SLCO1B1	IDA		Human	PMID:10873595
Molecular Function	GO:0022857	transmembrane transporter activity	slco1d1	IDA		Zfish	PMID:25088042
Cellular Component	GO:0009925	basal plasma membrane	SLCO1B3	IDA		Human	PMID:35307651
Cellular Component	GO:0009925	basal plasma membrane	SLCO1B1	IDA		Human	PMID:35307651
Cellular Component	GO:0016323	basolateral plasma membrane	Slco1b2	IDA		Rat	PMID:15288467|RGD:2303131
Cellular Component	GO:0005737	cytoplasm	Slco1b2	IDA		Rat	PMID:26665149|RGD:152995433
Cellular Component	GO:0005886	plasma membrane	SLCO1B3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLCO1B1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	Slco1b2	IDA		Rat	PMID:17329856|RGD:2303110
Cellular Component	GO:0005886	plasma membrane	slco1d1	IDA		Zfish	PMID:24126916
Biological Process	GO:0015721	bile acid and bile salt transport	Slco1b2	IDA		Rat	PMID:10500057|RGD:631887
Biological Process	GO:0001889	liver development	Slco1b2	IEP		Rat	PMID:15288467|RGD:2303131
Biological Process	GO:1905431	microcystin transport	slco1d1	IDA		Zfish	PMID:26055554
Biological Process	GO:0006857	oligopeptide transport	Slco1b2	IDA		Rat	PMID:11677211|RGD:2303133
Biological Process	GO:0015711	organic anion transport	slco1d1	IDA		Zfish	PMID:26055554
Biological Process	GO:0046677	response to antibiotic	Slco1b2	IEP		Rat	PMID:19118567|RGD:2303090
Biological Process	GO:0034097	response to cytokine	Slco1b2	IEP		Rat	PMID:17916651|RGD:2303109
Biological Process	GO:0051384	response to glucocorticoid	Slco1b2	IEP		Rat	PMID:19118567|RGD:2303090
Biological Process	GO:0033993	response to lipid	Slco1b2	IEP		Rat	PMID:19118567|RGD:2303090
Biological Process	GO:0032496	response to lipopolysaccharide	Slco1b2	IEP		Rat	PMID:18310902|RGD:2303092
Biological Process	GO:0043434	response to peptide hormone	Slco1b2	IEP		Rat	PMID:15840840|RGD:2303130
Biological Process	GO:0009410	response to xenobiotic stimulus	Slco1b2	IEP		Rat	PMID:19118567|RGD:2303090

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern