Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLF2
  • Mouse genes Slf2
  • Rat genes Slf2
  • Zfish genes slf2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slf2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q9BQI6	Human	PMID:25931565
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q96SB8	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:P25786	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q14142	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q5VUG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q8IY18	Human	PMID:32389690
Molecular Function	GO:0005515	protein binding	SLF2	IPI	UniProtKB:Q96SB8	Human	PMID:32389690
Molecular Function	GO:0044877	protein-containing complex binding	SLF2	IPI	UniProtKB:Q8IY18	Human	PMID:25931565
Molecular Function	GO:0044877	protein-containing complex binding	SLF2	IPI	UniProtKB:Q96SB8	Human	PMID:25931565
Molecular Function	GO:0031625	ubiquitin protein ligase binding	SLF2	IPI	UniProtKB:Q9NS91	Human	PMID:25931565
Cellular Component	GO:0000785	chromatin	SLF2	IDA		Human	PMID:24561620
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SLF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SLF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SLF2	IDA		Human	PMID:24561620
Cellular Component	GO:0035861	site of double-strand break	SLF2	IDA		Human	PMID:25931565
Biological Process	GO:0006974	DNA damage response	SLF2	IDA		Human	PMID:25931565
Biological Process	GO:2000781	positive regulation of double-strand break repair	SLF2	IDA		Human	PMID:25931565
Biological Process	GO:0034184	positive regulation of maintenance of mitotic sister chromatid cohesion	SLF2	IMP		Human	PMID:25931565
Biological Process	GO:0031334	positive regulation of protein-containing complex assembly	SLF2	IMP		Human	PMID:25931565
Biological Process	GO:1990166	protein localization to site of double-strand break	SLF2	IDA		Human	PMID:25931565

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern