Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLITRK2
  • Mouse genes Slitrk2
  • Rat genes Slitrk2
  • Zfish genes slitrk2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slitrk2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Slitrk2	IPI	UniProtKB:Q64487	Mouse	MGI:MGI:5902672|PMID:25989451
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK2	IDA		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK2	IMP		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK2	IDA		Human	PMID:27273464
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK2	IMP		Human	PMID:27273464
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK2	IDA		Human	PMID:23345436
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK2	IMP		Human	PMID:23345436
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK2	IDA		Human	PMID:27273464
Cellular Component	GO:0098978	glutamatergic synapse	SLITRK2	IMP		Human	PMID:27273464
Cellular Component	GO:0045211	postsynaptic membrane	Slitrk2	IDA		Rat	PMID:23345436|RGD:13702165
Biological Process	GO:0007409	axonogenesis	Slitrk2	IDA		Mouse	PMID:14550773
Biological Process	GO:0021782	glial cell development	slitrk2	IMP	ZFIN:ZDB-CRISPR-191009-35,ZFIN:ZDB-CRISPR-191009-36	Zfish	PMID:30924555
Biological Process	GO:0051965	positive regulation of synapse assembly	Slitrk2	IDA		Mouse	MGI:MGI:5902672|PMID:25989451
Biological Process	GO:0051965	positive regulation of synapse assembly	Slitrk2	IDA		Mouse	PMID:24613359
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK2	IDA		Human	PMID:23345436
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK2	IMP		Human	PMID:23345436
Biological Process	GO:0050807	regulation of synapse organization	SLITRK2	IDA		Human	PMID:27273464
Biological Process	GO:0050807	regulation of synapse organization	SLITRK2	IMP		Human	PMID:27273464
Biological Process	GO:0060041	retina development in camera-type eye	slitrk2	IMP	ZFIN:ZDB-CRISPR-191009-35,ZFIN:ZDB-CRISPR-191009-36	Zfish	PMID:30924555
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK2	IDA		Human	PMID:23345436
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK2	IMP		Human	PMID:23345436

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern