Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLITRK3
  • Mouse genes Slitrk3
  • Rat genes Slitrk3
  • Zfish genes slitrk3a,slitrk3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slitrk3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLITRK3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Slitrk3	IPI	PR:Q64487	Mouse	PMID:29107521
Molecular Function	GO:0005515	protein binding	Slitrk3	IPI	PR:Q69ZK9	Mouse	PMID:29107521
Cellular Component	GO:0009986	cell surface	Slitrk3	IDA		Mouse	PMID:29107521
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK3	IDA		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK3	IMP		Human	PMID:23345436
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK3	IDA		Human	PMID:27565350
Cellular Component	GO:0098982	GABA-ergic synapse	SLITRK3	IMP		Human	PMID:27565350
Cellular Component	GO:0098982	GABA-ergic synapse	Slitrk3	IDA		Mouse	PMID:29107521
Cellular Component	GO:0098982	GABA-ergic synapse	Slitrk3	IMP		Mouse	PMID:22286174
Cellular Component	GO:0098982	GABA-ergic synapse	Slitrk3	IDA		Mouse	PMID:22286174
Cellular Component	GO:0098839	postsynaptic density membrane	Slitrk3	IDA		Rat	PMID:23345436|RGD:13702165
Cellular Component	GO:0045211	postsynaptic membrane	Slitrk3	IDA		Mouse	PMID:22286174
Cellular Component	GO:0045211	postsynaptic membrane	Slitrk3	IMP		Mouse	PMID:22286174
Cellular Component	GO:0099634	postsynaptic specialization membrane	SLITRK3	IDA		Human	PMID:27565350
Cellular Component	GO:0099634	postsynaptic specialization membrane	SLITRK3	IMP		Human	PMID:27565350
Biological Process	GO:0007409	axonogenesis	Slitrk3	IDA		Mouse	PMID:14550773
Biological Process	GO:0097116	gephyrin clustering involved in postsynaptic density assembly	Slitrk3	IMP		Mouse	PMID:29107521
Biological Process	GO:0097116	gephyrin clustering involved in postsynaptic density assembly	Slitrk3	IMP	MGI:MGI:6119690	Mouse	PMID:29107521
Biological Process	GO:0097116	gephyrin clustering involved in postsynaptic density assembly	Slitrk3	IGI	MGI:MGI:2681835	Mouse	PMID:29107521
Biological Process	GO:0072578	neurotransmitter-gated ion channel clustering	Slitrk3	IMP	MGI:MGI:6119690	Mouse	PMID:29107521
Biological Process	GO:0072578	neurotransmitter-gated ion channel clustering	Slitrk3	IDA		Mouse	PMID:29107521
Biological Process	GO:0072578	neurotransmitter-gated ion channel clustering	Slitrk3	IGI	MGI:MGI:2681835	Mouse	PMID:29107521
Biological Process	GO:0072578	neurotransmitter-gated ion channel clustering	Slitrk3	IMP		Mouse	PMID:29107521
Biological Process	GO:0051965	positive regulation of synapse assembly	Slitrk3	IDA		Mouse	PMID:24613359
Biological Process	GO:0097107	postsynaptic density assembly	Slitrk3	IMP	MGI:MGI:6119690	Mouse	PMID:29107521
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK3	IDA		Human	PMID:23345436
Biological Process	GO:1905606	regulation of presynapse assembly	SLITRK3	IMP		Human	PMID:23345436
Biological Process	GO:1905606	regulation of presynapse assembly	Slitrk3	IMP		Mouse	PMID:22286174
Biological Process	GO:1905606	regulation of presynapse assembly	Slitrk3	IDA		Mouse	PMID:22286174
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK3	IDA		Human	PMID:23345436
Biological Process	GO:0099560	synaptic membrane adhesion	SLITRK3	IMP		Human	PMID:23345436
Biological Process	GO:0051932	synaptic transmission, GABAergic	Slitrk3	IDA		Mouse	PMID:29107521
Biological Process	GO:0051932	synaptic transmission, GABAergic	Slitrk3	IMP	MGI:MGI:6119690	Mouse	PMID:29107521
Biological Process	GO:0051932	synaptic transmission, GABAergic	Slitrk3	IGI	MGI:MGI:2681835	Mouse	PMID:29107521
Biological Process	GO:0051932	synaptic transmission, GABAergic	Slitrk3	IMP		Mouse	PMID:29107521
Biological Process	GO:0072553	terminal button organization	Slitrk3	IMP	MGI:MGI:6119690	Mouse	PMID:29107521

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern