Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLITRK6
  • Mouse genes Slitrk6
  • Rat genes Slitrk6
  • Zfish genes slitrk6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slitrk6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0071944	cell periphery	Slitrk6	IDA		Mouse	PMID:19936227
Cellular Component	GO:0009986	cell surface	SLITRK6	IDA		Human	PMID:23543054
Cellular Component	GO:0005886	plasma membrane	SLITRK6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	SLITRK6	IDA		Human	PMID:23543054
Biological Process	GO:0008344	adult locomotory behavior	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:21298075
Biological Process	GO:0031223	auditory behavior	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:21298075
Biological Process	GO:0002093	auditory receptor cell morphogenesis	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0007409	axonogenesis	Slitrk6	IDA		Mouse	PMID:14550773
Biological Process	GO:0043010	camera-type eye development	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:23543054
Biological Process	GO:0090102	cochlea development	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0042472	inner ear morphogenesis	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0060384	innervation	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0002088	lens development in camera-type eye	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:23543054
Biological Process	GO:0060007	linear vestibuloocular reflex	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:21298075
Biological Process	GO:0035264	multicellular organism growth	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:21298075
Biological Process	GO:0035264	multicellular organism growth	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0048812	neuron projection morphogenesis	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0051965	positive regulation of synapse assembly	Slitrk6	IDA		Mouse	PMID:24613359
Biological Process	GO:0001964	startle response	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0001964	startle response	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:21298075
Biological Process	GO:0007416	synapse assembly	SLITRK6	IMP		Human	PMID:23543054
Biological Process	GO:0007416	synapse assembly	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:23543054
Biological Process	GO:0060005	vestibular reflex	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0021562	vestibulocochlear nerve development	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:19936227
Biological Process	GO:0007601	visual perception	Slitrk6	IMP	MGI:MGI:4417931	Mouse	PMID:23543054

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern