Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLMAP
  • Mouse genes Slmap
  • Rat genes Slmap
  • Zfish genes slmapa,slmapb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slmap

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13043	Human	PMID:23386615
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13043	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13188	Human	PMID:24255178
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13043	Human	PMID:24366813
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13188	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLMAP	IPI	UniProtKB:Q13188	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Slmap	IPI	UniProtKB:Q8BH43	Mouse	MGI:MGI:3688344|PMID:15102471
Cellular Component	GO:0016020	membrane	Slmap	IDA		Mouse	PMID:10986292
Biological Process	GO:0072659	protein localization to plasma membrane	SLMAP	IMP		Human	PMID:23064965
Biological Process	GO:1900825	regulation of membrane depolarization during cardiac muscle cell action potential	SLMAP	IMP		Human	PMID:23064965
Biological Process	GO:1902305	regulation of sodium ion transmembrane transport	SLMAP	IMP		Human	PMID:23064965
Biological Process	GO:1905150	regulation of voltage-gated sodium channel activity	SLMAP	IMP		Human	PMID:23064965

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern