Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SLU7
  • Mouse genes Slu7
  • Rat genes Slu7
  • Zfish genes slu7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Slu7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030628	pre-mRNA 3'-splice site binding	SLU7	IDA		Human	PMID:15728250
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9H2H8	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:O43395	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q13435	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q6P2Q9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9H2H8	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9BZ95	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9H2H8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9NVV9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:P23508	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q13155	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q13643	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q17RB8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q4G0R1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q8NI38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q96N21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9H4E7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9Y6K9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:P14136	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:P19404	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q8WXH2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	SLU7	IPI	UniProtKB:Q9UBB4	Human	PMID:32814053
Molecular Function	GO:0000386	second spliceosomal transesterification activity	SLU7	IDA		Human	PMID:10197984
Molecular Function	GO:0008270	zinc ion binding	SLU7	IDA		Human	PMID:15181151
Cellular Component	GO:0071013	catalytic step 2 spliceosome	SLU7	IDA		Human	PMID:11991638
Cellular Component	GO:0005737	cytoplasm	SLU7	IDA		Human	PMID:21122810
Cellular Component	GO:0005829	cytosol	SLU7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SLU7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	SLU7	HDA		Human	PMID:19946888
Cellular Component	GO:0016607	nuclear speck	SLU7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	SLU7	IDA		Human	PMID:15728250
Cellular Component	GO:0005654	nucleoplasm	SLU7	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SLU7	IDA		Human	PMID:21122810
Cellular Component	GO:0030532	small nuclear ribonucleoprotein complex	SLU7	IDA		Human	PMID:15181151
Cellular Component	GO:0005681	spliceosomal complex	SLU7	IDA		Human	PMID:10197984
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	SLU7	IDA		Human	PMID:15728250
Biological Process	GO:0034605	cellular response to heat	SLU7	IDA		Human	PMID:21122810
Biological Process	GO:0006886	intracellular protein transport	SLU7	IDA		Human	PMID:21122810
Biological Process	GO:0000389	mRNA 3'-splice site recognition	SLU7	IDA		Human	PMID:15728250
Biological Process	GO:0000375	RNA splicing, via transesterification reactions	SLU7	IDA		Human	PMID:10197984

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern