Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Snai1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes SNAI1
- Mouse genes Snai1
- Rat genes Snai1
- Zfish genes snai1a,snai1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snai1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	SNAI1	IDA		Human	PMID:11912130
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Snai1	IDA		Mouse	MGI:MGI:2678855\|PMID:12917416
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Snai1	IDA		Mouse	PMID:17093497
Molecular Function	GO:0070888	E-box binding	SNAI1	IDA		Human	PMID:11912130
Molecular Function	GO:0019900	kinase binding	SNAI1	IPI	UniProtKB:P49841	Human	PMID:15448698
Molecular Function	GO:0051059	NF-kappaB binding	snai1a	IPI	UniProtKB:Q6K197	Zfish	PMID:19307597
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9Y297	Human	PMID:15448698
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P58215	Human	PMID:16096638
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9Y4K0	Human	PMID:16096638
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q96IF1	Human	PMID:18331720
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9UGP4	Human	PMID:18331720
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P49841	Human	PMID:19411070
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q04206	Human	PMID:19411070
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9Y297	Human	PMID:19411070
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q8N1E6	Human	PMID:19955572
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P04637	Human	PMID:20385133
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:O60341	Human	PMID:20389281
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P49841	Human	PMID:20389281
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9Y297	Human	PMID:20389281
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:O60341	Human	PMID:20562920
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q13547	Human	PMID:20562920
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P09874	Human	PMID:21577210
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P63085	Human	PMID:23644467
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P68104	Human	PMID:24209753
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:O14543	Human	PMID:25203322
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q86XK2	Human	PMID:25203322
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q8N1E6	Human	PMID:25203322
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q96BD6	Human	PMID:25203322
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9C035	Human	PMID:25203322
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P45481	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q04206	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q09472	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q13547	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q92769	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q96IF1	Human	PMID:25314079
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P35609	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P36406	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q5JR59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9UJV3-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P35609	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P36406	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q15323	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q15654	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q6A162	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q7Z3S9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:A6NEM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P35609	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:P36406	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q08043	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q12933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q14192	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q15654	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q5JVL4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q92990	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q96B26	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q99471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNAI1	IPI	UniProtKB:Q9Y2V7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Snai1	IPI	UniProtKB:Q7TQJ8\|UniProtKB:Q91XC0\|UniProtKB:Q9QXD8	Mouse	MGI:MGI:5318024\|PMID:18331720
Molecular Function	GO:0005515	protein binding	Snai1	IPI	UniProtKB:P09874	Mouse	MGI:MGI:5320269\|PMID:21577210
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	SNAI1	IDA		Human	PMID:11912130
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Snai1	IDA		Mouse	MGI:MGI:2678855\|PMID:12917416
Molecular Function	GO:0043565	sequence-specific DNA binding	Snai1	IDA		Mouse	PMID:9676199
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	SNAI1	IDA		Human	PMID:28473536
Cellular Component	GO:0005737	cytoplasm	SNAI1	IDA		Human	PMID:15448698
Cellular Component	GO:0005737	cytoplasm	SNAI1	IDA		Human	PMID:19955572
Cellular Component	GO:0005737	cytoplasm	SNAI1	IDA		Human	PMID:24209753
Cellular Component	GO:0005737	cytoplasm	Snai1	IDA		Mouse	MGI:MGI:2667516\|PMID:12832491
Cellular Component	GO:0005829	cytosol	SNAI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001650	fibrillar center	SNAI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	SNAI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SNAI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SNAI1	IDA		Human	PMID:15448698
Cellular Component	GO:0005634	nucleus	SNAI1	IDA		Human	PMID:19955572
Cellular Component	GO:0005634	nucleus	SNAI1	IDA		Human	PMID:23288509
Cellular Component	GO:0005634	nucleus	SNAI1	IDA		Human	PMID:24209753
Cellular Component	GO:0005634	nucleus	SNAI1	IDA		Human	PMID:25893292
Cellular Component	GO:0005634	nucleus	Snai1	IDA		Mouse	MGI:MGI:4837019\|PMID:20890042
Cellular Component	GO:0005634	nucleus	Snai1	IDA		Mouse	MGI:MGI:2667516\|PMID:12832491
Cellular Component	GO:0005634	nucleus	Snai1	IDA		Mouse	PMID:15630473
Cellular Component	GO:0005634	nucleus	Snai1	IDA		Mouse	PMID:17507657
Cellular Component	GO:0005634	nucleus	snai1a	IMP		Zfish	PMID:15129296
Cellular Component	GO:0005721	pericentric heterochromatin	SNAI1	IDA		Human	PMID:24239292
Cellular Component	GO:0005721	pericentric heterochromatin	Snai1	IDA		Mouse	MGI:MGI:5548026\|PMID:24239292
Biological Process	GO:0003261	cardiac muscle progenitor cell migration to the midline involved in heart field formation	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:24667151
Biological Process	GO:0060975	cardioblast migration to the midline involved in heart field formation	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:24667151
Biological Process	GO:0060536	cartilage morphogenesis	Snai1	IGI	MGI:MGI:1096393	Mouse	PMID:17376812
Biological Process	GO:0042074	cell migration involved in gastrulation	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:17965052
Biological Process	GO:0042074	cell migration involved in gastrulation	snai1a	IEP		Zfish	PMID:8306877
Biological Process	GO:0042074	cell migration involved in gastrulation	snai1a	IMP	ZFIN:ZDB-MRPHLNO-061206-4,ZFIN:ZDB-MRPHLNO-080207-1	Zfish	PMID:17965052
Biological Process	GO:0042074	cell migration involved in gastrulation	snai1a	IMP		Zfish	PMID:15129296
Biological Process	GO:0009953	dorsal/ventral pattern formation	snai1a	IDA		Zfish	PMID:22522081
Biological Process	GO:0009953	dorsal/ventral pattern formation	snai1a	IMP	ZFIN:ZDB-MRPHLNO-061206-4	Zfish	PMID:22522081
Biological Process	GO:0010631	epithelial cell migration	Snai1	IGI	MGI:MGI:1096393	Mouse	PMID:17376812
Biological Process	GO:0001837	epithelial to mesenchymal transition	SNAI1	IDA		Human	PMID:16096638
Biological Process	GO:0001837	epithelial to mesenchymal transition	Snai1	IMP		Mouse	MGI:MGI:5294539\|PMID:18832382
Biological Process	GO:0001837	epithelial to mesenchymal transition	Snai1	IDA		Mouse	MGI:MGI:1352954\|PMID:10655586
Biological Process	GO:0001837	epithelial to mesenchymal transition	Snai1	IMP		Mouse	MGI:MGI:2153695\|PMID:11689706
Biological Process	GO:0001837	epithelial to mesenchymal transition	snai1a	IMP		Zfish	PMID:15129296
Biological Process	GO:0003198	epithelial to mesenchymal transition involved in endocardial cushion formation	Snai1	IGI	UniProtKB:Q3UZ96	Mouse	MGI:MGI:3808643\|PMID:18663143
Biological Process	GO:0007369	gastrulation	snai1a	IDA		Zfish	PMID:16282981
Biological Process	GO:0031069	hair follicle morphogenesis	Snai1	IDA		Mouse	PMID:15630473
Biological Process	GO:0007507	heart development	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:24667151
Biological Process	GO:0070828	heterochromatin organization	Snai1	IMP		Mouse	MGI:MGI:5548026\|PMID:24239292
Biological Process	GO:0060972	left/right pattern formation	Snai1	IMP	MGI:MGI:2183156	Mouse	PMID:16801545
Biological Process	GO:0007498	mesoderm development	Snai1	IMP	MGI:MGI:2183156	Mouse	PMID:16801545
Biological Process	GO:0001707	mesoderm formation	Snai1	IMP		Mouse	MGI:MGI:2153695\|PMID:11689706
Biological Process	GO:0008078	mesodermal cell migration	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:17965052
Biological Process	GO:0008078	mesodermal cell migration	snai1a	IMP	ZFIN:ZDB-MRPHLNO-061206-4,ZFIN:ZDB-MRPHLNO-080207-1	Zfish	PMID:17965052
Biological Process	GO:0060806	negative regulation of cell differentiation involved in embryonic placenta development	Snai1	IDA		Mouse	PMID:9676199
Biological Process	GO:0022408	negative regulation of cell-cell adhesion	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:17965052
Biological Process	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator	SNAI1	IMP		Human	PMID:15314165
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Snai1	IDA		Mouse	MGI:MGI:1352954\|PMID:10655586
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Snai1	IDA		Mouse	MGI:MGI:2667516\|PMID:12832491
Biological Process	GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	SNAI1	IMP		Human	PMID:15314165
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SNAI1	IDA		Human	PMID:11912130
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	SNAI1	IMP		Human	PMID:15314165
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Snai1	IMP		Mouse	MGI:MGI:2667516\|PMID:12832491
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Snai1	IMP		Mouse	MGI:MGI:1352954\|PMID:10655586
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Snai1	IDA		Mouse	MGI:MGI:2678855\|PMID:12917416
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Snai1	IDA		Mouse	PMID:9676199
Biological Process	GO:0010957	negative regulation of vitamin D biosynthetic process	SNAI1	IDA		Human	PMID:19502595
Biological Process	GO:0061314	Notch signaling involved in heart development	Snai1	IGI	UniProtKB:Q01705	Mouse	MGI:MGI:4837019\|PMID:20890042
Biological Process	GO:0001649	osteoblast differentiation	SNAI1	IEP		Human	PMID:20128911
Biological Process	GO:0030335	positive regulation of cell migration	SNAI1	IMP		Human	PMID:15314165
Biological Process	GO:0030335	positive regulation of cell migration	SNAI1	IMP		Human	PMID:20018240
Biological Process	GO:0030335	positive regulation of cell migration	Snai1	IMP		Mouse	MGI:MGI:4837019\|PMID:20890042
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	SNAI1	IMP		Human	PMID:20018240
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Snai1	IDA		Mouse	MGI:MGI:2667516\|PMID:12832491
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	SNAI1	IMP		Human	PMID:20018240
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	SNAI1	IMP		Human	PMID:23288509
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	Snai1	IMP		Mouse	MGI:MGI:5548026\|PMID:24239292
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	Snai1	IMP		Mouse	MGI:MGI:4837019\|PMID:20890042
Biological Process	GO:0048920	posterior lateral line neuromast primordium migration	snai1b	IMP	ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:29945870
Biological Process	GO:0048920	posterior lateral line neuromast primordium migration	snai1b	IGI	ZFIN:ZDB-MRPHLNO-070507-5,ZFIN:ZDB-MRPHLNO-080310-1	Zfish	PMID:29945870
Biological Process	GO:2000810	regulation of bicellular tight junction assembly	SNAI1	IMP		Human	PMID:15314165
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Snai1	IGI	MGI:MGI:96920	Mouse	PMID:9676199
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Snai1	IGI	MGI:MGI:98510	Mouse	PMID:9676199
Biological Process	GO:0060021	roof of mouth development	Snai1	IGI	MGI:MGI:1096393	Mouse	PMID:17376812
Biological Process	GO:0060707	trophoblast giant cell differentiation	Snai1	IDA		Mouse	PMID:9676199

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.