Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNRPB2
  • Mouse genes Snrpb2
  • Rat genes Snrpb2
  • Zfish genes snrpb2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snrpb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P09661	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:O43829	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P14373	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q06547	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q14566	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q5JR59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q6NT76	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q8IX15-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q8ND90	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q8ND90	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P09661	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P09661	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:O43829	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P13196	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P14373	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P36406	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q8TAK5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q96NT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:Q9NX76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPB2	IPI	UniProtKB:P09661	Human	PMID:9716128
Molecular Function	GO:0005515	protein binding	Snrpb2	IPI	PR:Q8JZS6	Mouse	PMID:18360097
Molecular Function	GO:0005515	protein binding	Snrpb2	IPI	RGD:1305467	Rat	PMID:1707521|RGD:10045883
Molecular Function	GO:0070990	snRNP binding	Snrpb2	IDA		Rat	PMID:1707521|RGD:10045883
Cellular Component	GO:0071013	catalytic step 2 spliceosome	SNRPB2	IDA		Human	PMID:11991638
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	SNRPB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001650	fibrillar center	SNRPB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	SNRPB2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	SNRPB2	IDA		Human	PMID:28076346
Cellular Component	GO:0005634	nucleus	SNRPB2	IDA		Human	PMID:28781166
Cellular Component	GO:0030532	small nuclear ribonucleoprotein complex	Snrpb2	IDA		Rat	PMID:1707521|RGD:10045883
Cellular Component	GO:0005681	spliceosomal complex	SNRPB2	IDA		Human	PMID:9731529
Cellular Component	GO:0005686	U2 snRNP	SNRPB2	IDA		Human	PMID:2951739
Cellular Component	GO:0071007	U2-type catalytic step 2 spliceosome	SNRPB2	IDA		Human	PMID:28076346
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	SNRPB2	IDA		Human	PMID:28781166
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRPB2	IDA		Human	PMID:28076346
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRPB2	IDA		Human	PMID:28781166

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern