Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNRPC
  • Mouse genes Snrpc
  • Rat genes Snrpc
  • Zfish genes snrpc
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snrpc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P31483	Human	PMID:12486009
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P98175	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9BRX9	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:A1E959	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:A1KXE4-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O00167-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O00308	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O14979	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O15496	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O75420	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O75934	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:O95429	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P0C870	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P31943	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P49639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P86480	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q01196-8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q03060-25	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q13064	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q13351	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q13643	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q15038	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q15437	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q16610	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q3LHN2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q3LI59	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q3LI66	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q3LI70	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q3LI72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q52LG2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q5BKX5-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q5TA45	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q6NVU6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8IUC1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8IUC2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8IUC3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8IWL8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8N6F8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q8N9W6-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q93062-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q96AE4-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q96B26	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q96RU7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q99932-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9BPX1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9BRR9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9BTL3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9GZV8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9NXR5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9NZC7-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9NZQ3-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9P2R6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9ULX6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:Q9Y5V3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNRPC	IPI	UniProtKB:P14678	Human	PMID:8076607
Molecular Function	GO:0042803	protein homodimerization activity	SNRPC	IPI	UniProtKB:P09234	Human	PMID:8532530
Molecular Function	GO:0003723	RNA binding	SNRPC	HDA		Human	PMID:22681889
Molecular Function	GO:0003727	single-stranded RNA binding	SNRPC	IDA		Human	PMID:8798632
Molecular Function	GO:1990446	U1 snRNP binding	Snrpc	IDA		Rat	PMID:16502463|RGD:10448962
Molecular Function	GO:0008270	zinc ion binding	SNRPC	IDA		Human	PMID:15312772
Cellular Component	GO:0015030	Cajal body	SNRPC	IDA		Human	PMID:10068039
Cellular Component	GO:0005654	nucleoplasm	SNRPC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Snrpc	IDA		Rat	PMID:16502463|RGD:10448962
Cellular Component	GO:0005681	spliceosomal complex	SNRPC	IPI		Human	PMID:33677607
Cellular Component	GO:0005685	U1 snRNP	SNRPC	IPI		Human	PMID:33677607
Cellular Component	GO:0005685	U1 snRNP	SNRPC	IDA		Human	PMID:15312772
Cellular Component	GO:0005685	U1 snRNP	SNRPC	IDA		Human	PMID:15525645
Cellular Component	GO:0005685	U1 snRNP	SNRPC	IDA		Human	PMID:21113136
Cellular Component	GO:0005685	U1 snRNP	Snrpc	IDA		Rat	PMID:16502463|RGD:10448962
Biological Process	GO:0000398	mRNA splicing, via spliceosome	SNRPC	IDA		Human	PMID:8972845
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	snrpc	IMP	ZFIN:ZDB-GENO-100415-14	Zfish	PMID:21468032
Biological Process	GO:0000387	spliceosomal snRNP assembly	SNRPC	IDA		Human	PMID:8972845

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern