Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNTB1
  • Mouse genes Sntb1
  • Rat genes Sntb1
  • Zfish genes sntb1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Sntb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030165	PDZ domain binding	Sntb1	IPI	RGD:621660	Rat	PMID:15024025|RGD:1581350
Molecular Function	GO:0005515	protein binding	SNTB1	IPI	UniProtKB:O39198	Human	PMID:12477932
Molecular Function	GO:0005515	protein binding	SNTB1	IPI	UniProtKB:O95477	Human	PMID:16192269
Molecular Function	GO:0005515	protein binding	SNTB1	IPI	UniProtKB:P11532	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNTB1	IPI	UniProtKB:P11532	Human	PMID:7844150
Molecular Function	GO:0005515	protein binding	SNTB1	IPI	UniProtKB:P11532	Human	PMID:8576247
Molecular Function	GO:0005515	protein binding	Sntb1	IPI	UniProtKB:P25100	Mouse	MGI:MGI:6355583|PMID:16533813
Molecular Function	GO:0005515	protein binding	Sntb1	IPI	UniProtKB:O70585	Mouse	MGI:MGI:3703381|PMID:10893187
Molecular Function	GO:0005515	protein binding	Sntb1	IPI	PR:Q9JM63	Mouse	PMID:15310750
Cellular Component	GO:0005925	focal adhesion	SNTB1	HDA		Human	PMID:21423176
Cellular Component	GO:0032991	protein-containing complex	SNTB1	IDA		Human	PMID:18468998
Cellular Component	GO:0045202	synapse	Sntb1	IDA		Mouse	PMID:10995443

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern