Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNUPN
  • Mouse genes Snupn
  • Rat genes Snupn
  • Zfish genes snupn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snupn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNUPN	IPI	UniProtKB:O14980	Human	PMID:19339969
Molecular Function	GO:0005515	protein binding	SNUPN	IPI	UniProtKB:O14980	Human	PMID:19339972
Molecular Function	GO:0005515	protein binding	SNUPN	IPI	UniProtKB:Q6P5F9	Human	PMID:20972448
Molecular Function	GO:0005515	protein binding	SNUPN	IPI	UniProtKB:O14980	Human	PMID:23850451
Molecular Function	GO:0005515	protein binding	SNUPN	IPI	UniProtKB:Q6P5F9	Human	PMID:26673895
Cellular Component	GO:0005829	cytosol	SNUPN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0042564	NLS-dependent protein nuclear import complex	SNUPN	IPI		Human	PMID:18187419
Cellular Component	GO:0005654	nucleoplasm	SNUPN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	SNUPN	IDA		Human	PMID:9670026
Cellular Component	GO:0005886	plasma membrane	SNUPN	IDA		Human	GO_REF:0000052
Biological Process	GO:0006404	RNA import into nucleus	SNUPN	IDA		Human	PMID:9670026

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern