Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX18
  • Mouse genes Snx18
  • Rat genes Snx18
  • Zfish genes snx18a,snx18b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035091	phosphatidylinositol binding	Snx18	IDA		Mouse	PMID:21339182
Molecular Function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	SNX18	IDA		Human	PMID:23878278
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:O08816	Human	PMID:20427313
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q62910	Human	PMID:20427313
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q9Y5X1	Human	PMID:20427313
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:O95166,UniProtKB:Q05140,UniProtKB:Q10567,UniProtKB:Q9GZQ8	Human	PMID:23878278
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q9BXF6	Human	PMID:24591568
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:O14672	Human	PMID:25036101
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q13443	Human	PMID:25825872
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:P50570	Human	PMID:29437695
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:B2RXF5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:O75525	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q16082	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q16825	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q4VC12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q7L190	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q8N684-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX18	IPI	UniProtKB:Q9NYB9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Snx18	IPI	UniProtKB:P48023	Mouse	MGI:MGI:5512840|PMID:17761170
Molecular Function	GO:0005515	protein binding	Snx18	IPI	MGI:MGI:1920428	Mouse	PMID:21339182
Cellular Component	GO:0030136	clathrin-coated vesicle	SNX18	IDA		Human	PMID:20427313
Cellular Component	GO:0031410	cytoplasmic vesicle	SNX18	IDA		Human	PMID:22718350
Cellular Component	GO:0070062	extracellular exosome	SNX18	IDA		Human	PMID:15326289
Cellular Component	GO:0070062	extracellular exosome	SNX18	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	SNX18	HDA		Human	PMID:23533145
Cellular Component	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	SNX18	IDA		Human	PMID:20427313
Cellular Component	GO:0030426	growth cone	Snx18	IDA		Mouse	PMID:21339182
Cellular Component	GO:0043025	neuronal cell body	Snx18	IDA		Mouse	PMID:21339182
Cellular Component	GO:0055038	recycling endosome membrane	SNX18	IMP		Human	PMID:29437695
Biological Process	GO:0036089	cleavage furrow formation	SNX18	IMP		Human	PMID:22718350
Biological Process	GO:0006897	endocytosis	SNX18	IDA		Human	PMID:20427313
Biological Process	GO:0006897	endocytosis	SNX18	IMP		Human	PMID:22718350
Biological Process	GO:0016197	endosomal transport	SNX18	IMP		Human	PMID:22718350
Biological Process	GO:0000281	mitotic cytokinesis	SNX18	IMP		Human	PMID:22718350
Biological Process	GO:2000786	positive regulation of autophagosome assembly	SNX18	IMP		Human	PMID:29437695
Biological Process	GO:0043547	positive regulation of GTPase activity	SNX18	IDA		Human	PMID:20427313
Biological Process	GO:0015031	protein transport	SNX18	IMP		Human	PMID:29437695
Biological Process	GO:0061912	selective autophagy	SNX18	IMP		Human	PMID:23878278
Biological Process	GO:0061912	selective autophagy	SNX18	IPI	UniProtKB:O95166,UniProtKB:Q05140,UniProtKB:Q10567,UniProtKB:Q9GZQ8	Human	PMID:23878278

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern