Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX19
  • Mouse genes Snx19
  • Rat genes Snx19
  • Zfish genes snx19a,snx19b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx19

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	SNX19	IPI	UniProtKB:Q16849	Human	PMID:16273344
Cellular Component	GO:0005737	cytoplasm	SNX19	IDA		Human	PMID:19877062
Biological Process	GO:0002062	chondrocyte differentiation	SNX19	IMP		Human	PMID:19877062
Biological Process	GO:0002062	chondrocyte differentiation	Snx19	IMP		Mouse	PMID:19877062
Biological Process	GO:1990502	dense core granule maturation	SNX19	IGI	UniProtKB:Q6P4T1	Human	PMID:24843546
Biological Process	GO:1990502	dense core granule maturation	Snx19	IMP		Mouse	PMID:24843546
Biological Process	GO:0051649	establishment of localization in cell	Snx19	IMP		Mouse	PMID:24843546
Biological Process	GO:0021782	glial cell development	snx19a	IMP	ZFIN:ZDB-CRISPR-191008-26,ZFIN:ZDB-CRISPR-191008-27	Zfish	PMID:30924555
Biological Process	GO:0030073	insulin secretion	SNX19	IGI	UniProtKB:Q6P4T1	Human	PMID:24843546
Biological Process	GO:0030073	insulin secretion	Snx19	IMP		Mouse	PMID:24843546
Biological Process	GO:0060041	retina development in camera-type eye	snx19a	IMP	ZFIN:ZDB-CRISPR-191008-26,ZFIN:ZDB-CRISPR-191008-27	Zfish	PMID:30924555

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern