Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX20
  • Mouse genes Snx20
  • Rat genes Snx20
  • Zfish genes snx20
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx20

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	Snx20	IDA		Mouse	MGI:MGI:5688797|PMID:25882846
Molecular Function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	Snx20	IDA		Mouse	MGI:MGI:5688797|PMID:25882846
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q53G59	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q14242	Human	PMID:18196517
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:P13196	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:P43364-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q53G59	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q8IZU0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q9Y6A5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q8IZU0	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	SNX20	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Cellular Component	GO:0031901	early endosome membrane	Snx20	IDA		Mouse	MGI:MGI:5688797|PMID:25882846
Cellular Component	GO:0005654	nucleoplasm	SNX20	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern