Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SNX4
  • Mouse genes Snx4
  • Rat genes Snx4
  • Zfish genes snx4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Snx4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005154	epidermal growth factor receptor binding	SNX4	IDA		Human	PMID:9819414
Molecular Function	GO:0005158	insulin receptor binding	SNX4	IDA		Human	PMID:9819414
Molecular Function	GO:1990460	leptin receptor binding	SNX4	IDA		Human	PMID:9819414
Molecular Function	GO:0035091	phosphatidylinositol binding	SNX4	IMP		Human	PMID:17994011
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	SNX4	IMP		Human	PMID:33468622
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:P36897	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:P37173	Human	PMID:11279102
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9UNH7	Human	PMID:11279102
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:O00499	Human	PMID:12668730
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q8IX03	Human	PMID:17994011
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q5VWJ9	Human	PMID:23085988
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9UNH6	Human	PMID:23085988
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:P43360	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q15041	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q5VWJ9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9UNH6-3	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:O00499	Human	PMID:31413325
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q6ZPD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9UNH6-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9Y371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q5VWJ9	Human	PMID:32513819
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:Q9UNH6	Human	PMID:32513819
Molecular Function	GO:0005515	protein binding	SNX4	IPI	UniProtKB:O60749	Human	PMID:9819414
Molecular Function	GO:1990459	transferrin receptor binding	SNX4	IDA		Human	PMID:9819414
Cellular Component	GO:0005737	cytoplasm	SNX4	IDA		Human	PMID:11279102
Cellular Component	GO:0005868	cytoplasmic dynein complex	SNX4	IDA		Human	PMID:17994011
Cellular Component	GO:0005769	early endosome	SNX4	IDA		Human	PMID:32513819
Cellular Component	GO:0031901	early endosome membrane	SNX4	IDA		Human	PMID:33468622
Cellular Component	GO:0031901	early endosome membrane	SNX4	IDA		Human	PMID:17994011
Cellular Component	GO:0016020	membrane	SNX4	IDA		Human	PMID:9819414
Cellular Component	GO:0005886	plasma membrane	SNX4	IDA		Human	PMID:18253931
Cellular Component	GO:0098830	presynaptic endosome	Snx4	IDA		Mouse	PMID:33106523
Cellular Component	GO:0098830	presynaptic endosome	Snx4	IEP		Mouse	PMID:33106523
Cellular Component	GO:0098830	presynaptic endosome	Snx4	IMP		Mouse	PMID:33106523
Cellular Component	GO:0032991	protein-containing complex	SNX4	IDA		Human	PMID:9819414
Cellular Component	GO:0031201	SNARE complex	SNX4	IDA		Human	PMID:18253931
Biological Process	GO:0032456	endocytic recycling	SNX4	IMP		Human	PMID:17994011
Biological Process	GO:2000786	positive regulation of autophagosome assembly	SNX4	IMP		Human	PMID:32513819
Biological Process	GO:2000786	positive regulation of autophagosome assembly	SNX4	IMP		Human	PMID:33468622
Biological Process	GO:1903595	positive regulation of histamine secretion by mast cell	SNX4	IMP		Human	PMID:18253931
Biological Process	GO:0015031	protein transport	SNX4	IMP		Human	PMID:17994011
Biological Process	GO:0015031	protein transport	SNX4	IMP		Human	PMID:32513819
Biological Process	GO:0015031	protein transport	SNX4	IMP		Human	PMID:33468622

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern